RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LIG1P18858 919 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 FSHRP23945 695 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 HOXA9P31269 272 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 NCBP1Q09161 790 aaKnown RBP9.86□□□□□ -0.83
TPM3-201ENST00000271850 RAB33AQ14088 237 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 MAPK6Q16659 721 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 UPP1Q16831 310 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 SPECC1Q5M775 1068 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 PHLDB3Q6NSJ2 640 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
TPM3-201ENST00000271850 CEP57Q86XR8 500 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 ZBTB8OSQ8IWT0 167 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 NPAS3Q8IXF0 933 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 IGSF22Q8N9C0 903 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 FBXO18Q8NFZ0 1043 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 SLC7A14Q8TBB6 771 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 CCDC43Q96MW1 224 aaKnown RBP9.86□□□□□ -0.83
TPM3-201ENST00000271850 DDX23Q9BUQ8 820 aaKnown RBP9.86□□□□□ -0.83
TPM3-201ENST00000271850 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 PLA2G2FQ9BZM2 168 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 C2orf40Q9H1Z8 148 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 CDT1Q9H211 546 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 FOXP1Q9H334 677 aaPredicted RBP9.86□□□□□ -0.83
TPM3-201ENST00000271850 PIDD1Q9HB75 910 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.86□□□□□ -0.838e-12■■■□□ 17.5
TPM3-201ENST00000271850 CDH7Q9ULB5 785 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 PATJQ8NI35 1801 aa9.86□□□□□ -0.83
TPM3-201ENST00000271850 NCANO14594 1321 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 SMIM28A0A1B0GU29 152 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 ARHGEF35A5YM69 484 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 E9PMD0 336 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 POU2F2P09086 479 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 PROZP22891 400 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 FCARP24071 287 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 CDC25AP30304 524 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 OR1D2P34982 312 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 NPTX2P47972 431 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 RBM25P49756 843 aaKnown RBP9.85□□□□□ -0.83
TPM3-201ENST00000271850 STARD6P59095 220 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 CREMQ03060 361 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 AXDND1Q5T1B0 1012 aaPredicted RBP9.85□□□□□ -0.83
TPM3-201ENST00000271850 ATF7IP2Q5U623 682 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 PJA1Q8NG27 643 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 DEPTORQ8TB45 409 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 ING5Q8WYH8 240 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 NXPE3Q969Y0 559 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 C8orf76Q96K31 380 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 ACO2Q99798 780 aaKnown RBP9.85□□□□□ -0.83
TPM3-201ENST00000271850 DDX19AQ9NUU7 478 aaKnown RBP9.85□□□□□ -0.83
TPM3-201ENST00000271850 ARHGAP28Q9P2N2 729 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 DPP7Q9UHL4 492 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 KIAA1024Q9UPX6 916 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 CDY1Q9Y6F8 540 aa9.85□□□□□ -0.83
TPM3-201ENST00000271850 NCOR2Q9Y618 2525 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 WDR27A2RRH5 827 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 HIP1RO75146 1068 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 MOSPD3O75425 235 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 B3GAT3O94766 335 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 SEC24AO95486 1093 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 VNN2O95498 520 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 HNRNPA1P09651 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM3-201ENST00000271850 SP9P0CG40 484 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 CEBPBP17676 345 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 CCT6AP40227 531 aaKnown RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 CCR2P41597 374 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 ROR1Q01973 937 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 ORC2Q13416 577 aaPredicted RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 FZD5Q13467 585 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 SNW1Q13573 536 aaKnown RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 TRIM29Q14134 588 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 DCAF4L1Q3SXM0 396 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 PRSS36Q5K4E3 855 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 PPM1LQ5SGD2 360 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 DCLRE1AQ6PJP8 1040 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 C1orf186Q6ZWK4 172 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 C18orf25Q96B23 403 aaPredicted RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 TCEAL4Q96EI5 215 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 ZBTB45Q96K62 511 aaPredicted RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 KXD1Q9BQD3 176 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 TARS2Q9BW92 718 aaKnown RBP9.84□□□□□ -0.83
TPM3-201ENST00000271850 HAPLN2Q9GZV7 340 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 LIMCH1Q9UPQ0 1083 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 TNFSF13BQ9Y275 285 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 BACE2Q9Y5Z0 518 aa9.84□□□□□ -0.83
TPM3-201ENST00000271850 PHLPP2Q6ZVD8 1323 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
TPM3-201ENST00000271850 ABLIM3O94929 683 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 RHOP08100 348 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 CD72P21854 359 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 MUTP22033 750 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 U2AF2P26368 475 aaKnown RBP eCLIP9.83□□□□□ -0.845e-7■■■■□ 22.9
TPM3-201ENST00000271850 GRM5P41594 1212 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 PEX3P56589 373 aa9.83□□□□□ -0.84
TPM3-201ENST00000271850 OSTNP61366 133 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms