RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PRELPP51888 382 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CASP8Q14790 479 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 BHMT2Q9H2M3 363 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 GOLPH3LQ9H4A5 285 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TMEM2Q9UHN6 1383 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 ZBTB5O15062 677 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 EIF3HO15372 352 aaKnown RBP eCLIP13.9□□□□□ -0.188e-6■□□□□ 10.6
PRDM16-201ENST00000270722 CSPG5O95196 566 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 INPP5AQ14642 412 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TAB1Q15750 504 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 HIST2H2ACQ16777 129 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CDO1Q16878 200 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 HIST2H2AA3Q6FI13 130 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 EEPD1Q7L9B9 569 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 PPHLN1Q8NEY8 458 aaKnown RBP13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CCT7Q99832 543 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 VIPAS39Q9H9C1 493 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 DBNDD1Q9H9R9 158 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 ARHGEF3Q9NR81 526 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TKFCQ3LXA3 575 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
PRDM16-201ENST00000270722 VPS50Q96JG6 964 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TEX28O15482 410 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TADA2AO75478 443 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CASP14P31944 242 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 CYP4A22Q5TCH4 519 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 GFPT2O94808 682 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 AKT1P31749 480 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 PEX5LQ8IYB4 626 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 SNF8Q96H20 258 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 SARS2Q9NP81 518 aaKnown RBP13.9□□□□□ -0.18
PRDM16-201ENST00000270722 ANKRD12Q6UB98 2062 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 TRIM13O60858 407 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 MARK3P27448 753 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 BCAP31P51572 246 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 LPAR1Q92633 364 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 ATP10BO94823 1461 aa13.9□□□□□ -0.18
PRDM16-201ENST00000270722 MMP10P09238 476 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 DCP1BQ8IZD4 617 aaKnown RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 SOX13Q9UN79 622 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 AKAP5P24588 427 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 IFNAR2P48551 515 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 C3orf70A6NLC5 250 aaPredicted RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ALDH1A3P47895 512 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 RIPPLY1Q0D2K3 151 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 FANCLQ9NW38 375 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 DSEQ9UL01 958 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 GET4Q7L5D6 327 aaPredicted RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 YIPF2Q9BWQ6 316 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ZMYM1Q5SVZ6 1142 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 MDM1Q8TC05 714 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 SNRNP27Q8WVK2 155 aaKnown RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ANAPC7Q9UJX3 599 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 MYO5CQ9NQX4 1742 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ZFYVE16Q7Z3T8 1539 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 GDF11O95390 407 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 FNTAP49354 379 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ADCY1Q08828 1119 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 UGT3A1Q6NUS8 523 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 MNTQ99583 582 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 EPB41L5Q9HCM4 733 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 TK2O00142 265 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
PRDM16-201ENST00000270722 PM20D2Q8IYS1 436 aa13.89□□□□□ -0.19
PRDM16-201ENST00000270722 CSTF3Q12996 717 aaKnown RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 DMC1Q14565 340 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 GRAMD1AQ96CP6 724 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 NPY2RP49146 381 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 MMP14P50281 582 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 RASSF3Q86WH2 238 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 ZNF555Q8NEP9 628 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 TUBGCP4Q9UGJ1 667 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 PEX3P56589 373 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 PSMC5P62195 406 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 GPC5P78333 572 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms