RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FAM167BQ9BTA0 163 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 CTNNAL1Q9UBT7 734 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 CCT8L1PA6NM43 557 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 PIAS1O75925 651 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 LCA5LO95447 670 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 P3H1Q32P28 736 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 NME8Q8N427 588 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SNF8Q96H20 258 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 RILPQ96NA2 401 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 RBM15Q96T37 977 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSPG5-201ENST00000264723 PFASO15067 1338 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 A0A0G2JND7 137 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 WEE2P0C1S8 567 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 CYB5D1Q6P9G0 228 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 KCTD6Q8NC69 237 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 ZSWIM2Q8NEG5 633 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 MRPL4Q9BYD3 311 aaKnown RBP21.03■□□□□ 0.96
CSPG5-201ENST00000264723 TCRBV7S2A1N4TA0A589 114 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 SCTRP47872 440 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 TTLL4Q14679 1199 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 CDC42EP4Q9H3Q1 356 aaKnown RBP21.03■□□□□ 0.96
CSPG5-201ENST00000264723 KCND2Q9NZV8 630 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 NWD2Q9ULI1 1742 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 HLA-DRAP01903 254 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 ARSEP51690 589 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 PPATQ06203 517 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 SMTNL2Q2TAL5 461 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 PYROXD1Q8WU10 500 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 TSNARE1Q96NA8 513 aa21.03■□□□□ 0.96
CSPG5-201ENST00000264723 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
CSPG5-201ENST00000264723 AGTP01019 485 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 RFX8Q6ZV50 586 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 TRPM8Q7Z2W7 1104 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 CNTN2Q02246 1040 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 PDIA2Q13087 525 aaKnown RBP21.02■□□□□ 0.96
CSPG5-201ENST00000264723 COBLL1Q53SF7 1204 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 SV2AQ7L0J3 742 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 STMN2Q93045 179 aa21.02■□□□□ 0.96
CSPG5-201ENST00000264723 MYO5AQ9Y4I1 1855 aaKnown RBP21.02■□□□□ 0.95
CSPG5-201ENST00000264723 PRKCBP05771 671 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 PRKCIP41743 596 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 GPC3P51654 580 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 SNX16P57768 344 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 DUOXA2Q1HG44 320 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 KAT2BQ92831 832 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 FAM167AQ96KS9 214 aa21.02■□□□□ 0.95
CSPG5-201ENST00000264723 NCOA4Q13772 614 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 RCN2Q14257 317 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 CFAP57Q96MR6 1250 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 HSD17B14Q9BPX1 270 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 SPC25Q9HBM1 224 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 RBAK-RBAKDNI3L0D1 243 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 TROVE2P10155 538 aaKnown RBP eCLIP21.01■□□□□ 0.95
CSPG5-201ENST00000264723 TRIM50Q86XT4 487 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 AGO4Q9HCK5 861 aaKnown RBP21.01■□□□□ 0.95
CSPG5-201ENST00000264723 PXMP2Q9NR77 195 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 CHST7Q9NS84 486 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 ANKRD63C9JTQ0 380 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 RPS12P25398 132 aaKnown RBP21.01■□□□□ 0.95
CSPG5-201ENST00000264723 DNAJC3Q13217 504 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 ATL2Q8NHH9 583 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 TTC17Q96AE7 1141 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 OSBPL8Q9BZF1 889 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 AP5M1Q9H0R1 490 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 ROBO3Q96MS0 1386 aa21.01■□□□□ 0.95
CSPG5-201ENST00000264723 VIL1P09327 827 aaKnown RBP21■□□□□ 0.95
CSPG5-201ENST00000264723 ITGB5P18084 799 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 ANXA13P27216 316 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 BCL9LQ86UU0 1499 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 OPLAHO14841 1288 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 ORC1Q13415 861 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 PGM5Q15124 567 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 RHOT1Q8IXI2 618 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 PRELID2Q8N945 189 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 P3H4Q92791 437 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 FAM81BQ96LP2 452 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 SPON1Q9HCB6 807 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 CYP26B1Q9NR63 512 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 PNMA3Q9UL41 463 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 MYH13Q9UKX3 1938 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 VWA5AO00534 786 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 MAN1A1P33908 653 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 ARL1P40616 181 aaPredicted RBP21■□□□□ 0.95
CSPG5-201ENST00000264723 BBOF1Q8ND07 529 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 SNED1Q8TER0 1413 aa21■□□□□ 0.95
CSPG5-201ENST00000264723 TRAPPC3O43617 180 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 CLK2P49760 499 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 SPATA21Q7Z572 469 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 COG5Q9UP83 839 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 CASZ1Q86V15 1759 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 AKAP11Q9UKA4 1901 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 PSMD10O75832 226 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 MAP3K6O95382 1288 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 MSH2P43246 934 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 PSMC1P62191 440 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 ZC3H18Q86VM9 953 aaKnown RBP20.99■□□□□ 0.95
CSPG5-201ENST00000264723 CCNYQ8ND76 341 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 RPS6KC1Q96S38 1066 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 ANKEF1Q9NU02 776 aa20.99■□□□□ 0.95
CSPG5-201ENST00000264723 A0A0A6YYK5 440 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms