RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZC2HC1CQ53FD0 456 aaPredicted RBP17.53■□□□□ 0.4
USE1-201ENST00000263897 CCDC73Q6ZRK6 1079 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 ANKS3Q6ZW76 656 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 ZNF720Q7Z2F6 126 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
USE1-201ENST00000263897 PIDD1Q9HB75 910 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 FBXW11Q9UKB1 542 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 BACE2Q9Y5Z0 518 aa17.53■□□□□ 0.4
USE1-201ENST00000263897 MUC6Q6W4X9 2439 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 LACTBL1A8MY62 500 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 FAM189A1O60320 539 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 ASGR2P07307 311 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 ADRB2P07550 413 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
USE1-201ENST00000263897 SLC39A4Q6P5W5 647 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 RSPO2Q6UXX9 243 aaPredicted RBP17.52■□□□□ 0.4
USE1-201ENST00000263897 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 UBALD2Q8IYN6 164 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 STAMQ92783 540 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 DNAJC19Q96DA6 116 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 NUB1Q9Y5A7 615 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 ZNF318Q5VUA4 2279 aa17.52■□□□□ 0.4
USE1-201ENST00000263897 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
USE1-201ENST00000263897 A0A087X0B3 334 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 ANKRD63C9JTQ0 380 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 SYN3O14994 580 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 SPTLC2O15270 562 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
USE1-201ENST00000263897 PPP6R2O75170 966 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 HNRNPA1P09651 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
USE1-201ENST00000263897 STAT6P42226 847 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 SPAG1Q07617 926 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 ENOX2Q16206 610 aaKnown RBP17.51■□□□□ 0.39
USE1-201ENST00000263897 UVSSAQ2YD98 709 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 ZBTB41Q5SVQ8 909 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 SFR1Q86XK3 245 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 ASIC4Q96FT7 647 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 SUSD3Q96L08 255 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 TSPAN18Q96SJ8 248 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 MSTO1Q9BUK6 570 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 RPF1Q9H9Y2 349 aaKnown RBP17.51■□□□□ 0.39
USE1-201ENST00000263897 SEL1LQ9UBV2 794 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.51■□□□□ 0.39
USE1-201ENST00000263897 CDY1Q9Y6F8 540 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
USE1-201ENST00000263897 CLUHO75153 1309 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 GAP43P17677 238 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 CYP3A5P20815 502 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 LRPAP1P30533 357 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 PPP2R3AQ06190 1150 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 MRPL58Q14197 206 aaKnown RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 PPM1LQ5SGD2 360 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 VARS2Q5ST30 1063 aaKnown RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 LIN9Q5TKA1 542 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 SLFN12LQ6IEE8 588 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 RTL10Q7L3V2 364 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 CD302Q8IX05 232 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 KIF12Q96FN5 646 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 STRA6Q9BX79 667 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 TUBGCP4Q9UGJ1 667 aa17.5■□□□□ 0.39
USE1-201ENST00000263897 CPSF3Q9UKF6 684 aaKnown RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 UBQLN1Q9UMX0 589 aaKnown RBP17.5■□□□□ 0.39
USE1-201ENST00000263897 DOCK8Q8NF50 2099 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 TBC1D4O60343 1298 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 PPP1R37O75864 691 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 YEATS4O95619 227 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 C8AP07357 584 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 ZSCAN22P10073 491 aaPredicted RBP17.49■□□□□ 0.39
USE1-201ENST00000263897 HOXA9P31269 272 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 GBP2P32456 591 aaPredicted RBP17.49■□□□□ 0.39
USE1-201ENST00000263897 SLC8B1Q6J4K2 584 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 FBXL6Q8N531 539 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 PDILTQ8N807 584 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 HVCN1Q96D96 273 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
USE1-201ENST00000263897 KCNK12Q9HB15 430 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.49■□□□□ 0.39
USE1-201ENST00000263897 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
USE1-201ENST00000263897 TISP43B9A030 160 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 H7C4K7 107 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 XPOTO43592 962 aaKnown RBP17.48■□□□□ 0.39
USE1-201ENST00000263897 CUTAO60888 179 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 ABLIM3O94929 683 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 IDEP14735 1019 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 MCM4P33991 863 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 ACOT2P49753 483 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 POSTNQ15063 836 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 TMEM130Q8N3G9 435 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 SLC7A14Q8TBB6 771 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 FAM212AQ96EL1 285 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 MYADMQ96S97 322 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms