RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GOLGA2P5Q9HBQ8 144 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 NLRC4Q9NPP4 1024 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 SCN1AP35498 2009 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 MICAL3Q7RTP6 2002 aa10.52□□□□□ -0.73
SNRNP40-201ENST00000263694 ITIH6Q6UXX5 1313 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 GTPBP10A4D1E9 387 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 ARL5CA6NH57 179 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 PPEF2O14830 753 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 N4BP1O75113 896 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 POMCP01189 267 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 KRT19P08727 400 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 FGFR1P11362 822 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 TRIM21P19474 475 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 IGFBP6P24592 240 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 PIK3CAP42336 1068 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 GATMP50440 423 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 SCNN1GP51170 649 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 MYL6P60660 151 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 POLR2FP61218 127 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 FAM189BP81408 668 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 ENPEPQ07075 957 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 KLHDC7AQ5VTJ3 777 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■■■■□ 25.5
SNRNP40-201ENST00000263694 RRAGAQ7L523 313 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 GSTCDQ8NEC7 633 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 RABGGTAQ92696 567 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 KAT5Q92993 513 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 ANKRD36BP1Q96IX9 119 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 TRAIPQ9BWF2 469 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 FTHL17Q9BXU8 183 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 TTYH3Q9C0H2 523 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 GANQ9H2C0 597 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 PLEKHA5Q9HAU0 1116 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 CNTN3Q9P232 1028 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 INPP5FQ9Y2H2 1132 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 COQ4Q9Y3A0 265 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 FHOD1Q9Y613 1164 aa10.51□□□□□ -0.73
SNRNP40-201ENST00000263694 TTC3P53804 2025 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 TDRD15B5MCY1 1934 aaKnown RBP10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 PMM2O15305 246 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 P4HA2O15460 535 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 CLSTN1O94985 981 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 TNNC2P02585 160 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 ITGB3P05106 788 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 PNMA6AP0CW24 399 aaPredicted RBP10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 RAB27AP51159 221 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 POU5F1Q01860 360 aaKnown RBP10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 NCOA4Q13772 614 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 ZBTB6Q15916 424 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 XKR4Q5GH76 650 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 IQCEQ6IPM2 695 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 MFSD5Q6N075 450 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 TMCO2Q7Z6W1 182 aaPredicted RBP10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 CD302Q8IX05 232 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 TC2NQ8N9U0 490 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 CXorf38Q8TB03 319 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 HELQQ8TDG4 1101 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 BADQ92934 168 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 RSAD1Q9HA92 442 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 APOBEC3GQ9HC16 384 aaKnown RBP10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 DPP3Q9NY33 737 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 AGAP1Q9UPQ3 857 aa10.5□□□□□ -0.73
SNRNP40-201ENST00000263694 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.737e-10■□□□□ 9.3
SNRNP40-201ENST00000263694 OFD1O75665 1012 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 UPP2O95045 317 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 UCHL3P15374 230 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 KCNE1P15382 129 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 POLR2BP30876 1174 aaKnown RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 CETN1Q12798 172 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 TRPC3Q13507 836 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 ARHGAP44Q17R89 818 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 CLLU1OSQ5K130 101 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 E4F1Q66K89 784 aaPredicted RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 CNKSR3Q6P9H4 555 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 C16orf59Q7L2K0 433 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 CACTINQ8WUQ7 758 aaKnown RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 APBB2Q92870 758 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 PGBD4Q96DM1 585 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 PPP1R10Q96QC0 940 aaKnown RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 UBE2TQ9NPD8 197 aaPredicted RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 PLCB1Q9NQ66 1216 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 IMPACTQ9P2X3 320 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 DNAJC12Q9UKB3 198 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 ZMYND8Q9ULU4 1186 aaPredicted RBP10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 CAPN11Q9UMQ6 739 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 GIT1Q9Y2X7 761 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 C2CD2Q9Y426 696 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
SNRNP40-201ENST00000263694 AKR1B15C9JRZ8 316 aaPredicted RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 EVI5O60447 810 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 MFAP3LO75121 409 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PARNO95453 639 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms