RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 LIN9Q5TKA1 542 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 GJD4Q96KN9 370 aaPredicted RBP14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 EHMT1Q9H9B1 1298 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 TUFT1Q9NNX1 390 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PPARGC1AQ9UBK2 798 aaKnown RBP14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 DENND3A2RUS2 1198 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 O00370 1275 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 AP1G2O75843 785 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 ITGB5P18084 799 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PPP2R5EQ16537 467 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PREPLQ4J6C6 727 aaPredicted RBP14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PODNQ7Z5L7 613 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 PPP1R36Q96LQ0 422 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 RAB20Q9NX57 234 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
TUBGCP3-201ENST00000261965 BTNL10A8MVZ5 291 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 ERMARDQ5T6L9 678 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 CC2D2BQ6DHV5 1058 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 TMEM270Q6UE05 265 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 KREMEN1Q96MU8 473 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZNF341Q9BYN7 854 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZDHHC18Q9NUE0 388 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 IRAK4Q9NWZ3 460 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 NXF1Q9UBU9 619 aaKnown RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 MAPK13O15264 365 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 EIF3DO15371 548 aaKnown RBP eCLIP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 RIPK2O43353 540 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 RTN2O75298 545 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 AGTP01019 485 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 CDO1Q16878 200 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 SWT1Q5T5J6 900 aaKnown RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 EPS8L1Q8TE68 723 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 BORCS6Q96GS4 357 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 LAMB1P07942 1786 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 ENTPD5O75356 428 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 CIB2O75838 187 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZSCAN5DPP0CG00 497 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 RALAP11233 206 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 EPHB2P29323 1055 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 HOXA10P31260 410 aaPredicted RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 MAN1A1P33908 653 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 MFAP3P55082 362 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 DHX34Q14147 1143 aaKnown RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 DLGAP5Q15398 846 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 TXLNGQ9NUQ3 528 aa14.86□□□□□ -0.03
TUBGCP3-201ENST00000261965 TNRC6CQ9HCJ0 1690 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZBED4O75132 1171 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 SLC25A41Q8N5S1 370 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 MKL1Q969V6 931 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 TRABDQ9H4I3 376 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 CES2O00748 559 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 TRPA1O75762 1119 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 RRM1P23921 792 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 YWHABP31946 246 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 ACOT2P49753 483 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 CDR2Q01850 454 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 POU5F1Q01860 360 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 UGCGQ16739 394 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 BMT2Q1RMZ1 405 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 MOXD1Q6UVY6 613 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 SDCCAG8Q86SQ7 713 aaPredicted RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 PYROXD1Q8WU10 500 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 DDX50Q9BQ39 737 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 MAK16Q9BXY0 300 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 H0YIN7 160 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 MTMR1Q13613 665 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 AUHQ13825 339 aaKnown RBP14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 C6orf89Q6UWU4 347 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 CEP170P1Q96L14 293 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 MBOAT7Q96N66 472 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 KMT5AQ9NQR1 393 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 ADAM22Q9P0K1 906 aa14.85□□□□□ -0.03
TUBGCP3-201ENST00000261965 GTPBP10A4D1E9 387 aaKnown RBP14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 MIF4GDA9UHW6 222 aaKnown RBP14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 BANF1O75531 89 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 CYP11B1P15538 503 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 ARSEP51690 589 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 CCNHP51946 323 aaPredicted RBP14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 MTMR2Q13614 643 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 ATP13A4Q4VNC1 1196 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 DACT2Q5SW24 774 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZBTB33Q86T24 672 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 PIP4K2CQ8TBX8 421 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 AGAP1Q9UPQ3 857 aa14.84□□□□□ -0.03
TUBGCP3-201ENST00000261965 TTLL3Q9Y4R7 772 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms