RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 CAMK4Q16566 473 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 RNF151Q2KHN1 245 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ERCC6LQ2NKX8 1250 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 LSM12Q3MHD2 195 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PLEKHO1Q53GL0 409 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 C2orf27AQ580R0 203 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 TSHZ3Q63HK5 1081 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 CC2D1AQ6P1N0 951 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 WDR93Q6P2C0 686 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 C11orf57Q6ZUT1 292 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ARHGEF25Q86VW2 580 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 TMEM139Q8IV31 216 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 IFNL3Q8IZI9 196 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 NECAB1Q8N987 351 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 KBTBD3Q8NAB2 608 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MLKLQ8NB16 471 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 KCNH5Q8NCM2 988 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 BICD2Q8TD16 824 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 THAP3Q8WTV1 239 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 EXTL1Q92935 676 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 RNPC3Q96LT9 517 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PANX2Q96RD6 677 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 AARSD1Q9BTE6 412 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ZDHHC5Q9C0B5 715 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 FAM107BQ9H098 131 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ARFGAP3Q9NP61 516 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MED4Q9NPJ6 270 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 TMEM260Q9NX78 707 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MIS18AQ9NYP9 233 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 FEZ2Q9UHY8 353 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PCDHA7Q9UN72 937 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 L1RE1Q9UN81 338 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PTPN22Q9Y2R2 807 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MRFAP1Q9Y605 127 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 UBR1Q8IWV7 1749 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MARF1Q9Y4F3 1742 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 NID2Q14112 1375 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 NFAT5O94916 1531 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 SIPA1L3O60292 1781 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CCDC163A0A0D9SF12 145 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 A0A0D9SFI3 127 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 USP27XA6NNY8 438 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 H3BQV1 296 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 PPP1R12AO14974 1030 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 KDM6AO15550 1401 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CIAO1O76071 339 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 SOD2P04179 222 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ZFYP08048 801 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CYP21A2P08686 494 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 FDPSP14324 419 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 HOXA7P31268 230 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 GJA4P35212 333 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 MAGEA9P43362 315 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 AARSP49588 968 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 MMP14P50281 582 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 MYL5Q02045 173 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ITIH3Q06033 890 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 SMC1AQ14683 1233 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 PPP2R5BQ15173 497 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 STILQ15468 1287 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ELF2Q15723 593 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 NTRK3Q16288 839 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 BEND6Q5SZJ8 279 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 USP53Q70EK8 1073 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 AACSQ86V21 672 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 SUGP1Q8IWZ8 645 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 NLGN4XQ8N0W4 816 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CEP112Q8N8E3 955 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 C1orf131Q8NDD1 294 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 IL17DQ8TAD2 202 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CFHR4Q92496 578 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 RPGRIP1Q96KN7 1286 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 FAM227BQ96M60 508 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 USP28Q96RU2 1077 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 SDF4Q9BRK5 362 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 XPO4Q9C0E2 1151 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 GOLPH3LQ9H4A5 285 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 GEMIN8Q9NWZ8 242 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 C9orf78Q9NZ63 289 aaPredicted RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 DIP2BQ9P265 1576 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 HOOK1Q9UJC3 728 aaKnown RBP4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ADAM21Q9UKJ8 722 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 USP16Q9Y5T5 823 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 PIK3C2AO00443 1686 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 CAMTA1Q9Y6Y1 1673 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 TNRQ92752 1358 aa4.25□□□□□ -1.73
CDRT1-201ENST00000261644 ZMYM6O95789 1325 aa4.24□□□□□ -1.73
CDRT1-201ENST00000261644 ITIH6Q6UXX5 1313 aa4.24□□□□□ -1.73
CDRT1-201ENST00000261644 ATXN2Q99700 1313 aaKnown RBP4.24□□□□□ -1.73
CDRT1-201ENST00000261644 STK36Q9NRP7 1315 aa4.24□□□□□ -1.73
CDRT1-201ENST00000261644 A0A0U1RQG5 324 aaPredicted RBP4.24□□□□□ -1.73
CDRT1-201ENST00000261644 TARSL2A2RTX5 802 aaKnown RBP4.24□□□□□ -1.73
CDRT1-201ENST00000261644 VWA3AA6NCI4 1184 aa4.24□□□□□ -1.73
CDRT1-201ENST00000261644 SPTLC2O15270 562 aa4.24□□□□□ -1.73
CDRT1-201ENST00000261644 RNMTO43148 476 aaKnown RBP4.24□□□□□ -1.73
CDRT1-201ENST00000261644 MAFO75444 373 aaPredicted RBP4.24□□□□□ -1.73
CDRT1-201ENST00000261644 ERLIN1O75477 346 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms