RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 TEX2Q8IWB9 1127 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 FBXL13Q8NEE6 735 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 ATL2Q8NHH9 583 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CHURC1Q8WUH1 139 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CCDC17Q96LX7 622 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 FAM20AQ96MK3 541 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 KDM4CQ9H3R0 1056 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 ACSS2Q9NR19 701 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 USP21Q9UK80 565 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 A0A1W2PPM1 405 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 INO80B-WBP1J3KQ70 363 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 RASSF9O75901 435 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 CYP11B1P15538 503 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 TCN1P20061 433 aaPredicted RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 PDE1BQ01064 536 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 ZCCHC23Q6ZST2 131 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 NLRP9Q7RTR0 991 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 ZNF720Q7Z2F6 126 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 SESTD1Q86VW0 696 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 LRRC6Q86X45 466 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 POU5F2Q8N7G0 328 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 INO80BQ9C086 356 aaPredicted RBP10.7□□□□□ -0.7
PALB2-201ENST00000261584 LMTK3Q96Q04 1460 aa10.7□□□□□ -0.7
PALB2-201ENST00000261584 LUC7L3O95232 432 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 SPATA31C1P0DKV0 1188 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 SKIP12755 728 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 CCND1P24385 295 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 SHMT1P34896 483 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 EFTUD2Q15029 972 aaKnown RBP eCLIP10.69□□□□□ -0.74e-10■■■□□ 17.8
PALB2-201ENST00000261584 DUPD1Q68J44 220 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 ARID3BQ8IVW6 561 aaPredicted RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 LRRC57Q8N9N7 239 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 CEP70Q8NHQ1 597 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 P3H4Q92791 437 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 ACAP3Q96P50 834 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 APOL6Q9BWW8 343 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 NINJ2Q9NZG7 142 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 DNAJC6O75061 913 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 DGKIO75912 1065 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 HSPA6P17066 643 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 YWHABP31946 246 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 ZNF354CQ86Y25 554 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 PDIK1LQ8N165 341 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 GBP7Q8N8V2 638 aaPredicted RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 UNKQ9C0B0 810 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 TNS2Q63HR2 1409 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 PITPNM2Q9BZ72 1349 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 POLRMTO00411 1230 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 NVLO15381 856 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 TTC4O95801 387 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 ATP6V1B1P15313 513 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 RRP1BQ14684 758 aaKnown RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 SLC30A9Q6PML9 568 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 FBXO41Q8TF61 875 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 NLRP4Q96MN2 994 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 TRAIPQ9BWF2 469 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 ZMYND8Q9ULU4 1186 aaPredicted RBP10.69□□□□□ -0.7
PALB2-201ENST00000261584 NFAT5O94916 1531 aa10.69□□□□□ -0.7
PALB2-201ENST00000261584 C21orf2O43822 256 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 BRD2P25440 801 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 RHBDL3P58872 404 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 KLC1Q07866 573 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TMED1Q13445 227 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TFDP1Q14186 410 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 CRYMQ14894 314 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 RABGAP1LQ5R372 815 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 FAF2Q96CS3 445 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MSTO1Q9BUK6 570 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 DNPEPQ9ULA0 475 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 NEMP1O14524 444 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 COPEO14579 308 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 KIF1CO43896 1103 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 PFDN1O60925 122 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 APRTP07741 180 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MMP10P09238 476 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TMEM191BP0C7N4 346 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 PHBP35232 272 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 NLRP11P59045 1033 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 IFRD2Q12894 506 aaPredicted RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 TTLL12Q14166 644 aaPredicted RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 HIF1AQ16665 826 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 SLC27A3Q5K4L6 730 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MROH9Q5TGP6 573 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms