RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SERPING1P05155 500 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
TMEM260-201ENST00000261556 KPNA1P52294 538 aaPredicted RBP13.69□□□□□ -0.22
TMEM260-201ENST00000261556 PTK2Q05397 1052 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 AP1B1Q10567 949 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 MESDQ14696 234 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 DCUN1D2Q6PH85 259 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 LRRC6Q86X45 466 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 EXOC8Q8IYI6 725 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 GJA10Q969M2 543 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 SLCO1B3Q9NPD5 702 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
TMEM260-201ENST00000261556 SRGNP10124 158 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 CENPTQ96BT3 561 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 C10orf88Q9H8K7 445 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 MARCOQ9UEW3 520 aaPredicted RBP13.68□□□□□ -0.22
TMEM260-201ENST00000261556 ARHGAP26Q9UNA1 814 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM260-201ENST00000261556 IQGAP3Q86VI3 1631 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 C1orf232A0A0U1RR37 186 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 GH1P01241 217 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 NAT2P11245 290 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 ATF2P15336 505 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 MTMR2Q13614 643 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 KCTD2Q14681 263 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 PDK3Q15120 406 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 TRIM39Q9HCM9 518 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 DTNAQ9Y4J8 743 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 FBP2O00757 339 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 MGEA5O60502 916 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 TBX10O75333 385 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 IFNB1P01574 187 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 RPL5P46777 297 aaKnown RBP13.68□□□□□ -0.22
TMEM260-201ENST00000261556 KCNJ1P48048 391 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 HIC1Q14526 733 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 SLFN12Q8IYM2 578 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 RNF34Q969K3 372 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
TMEM260-201ENST00000261556 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
TMEM260-201ENST00000261556 M0QZ92 97 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CLUL1Q15846 466 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 KAZNQ674X7 775 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TEKT3Q9BXF9 490 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 MAK16Q9BXY0 300 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 GOLGA8IPA6NC78 632 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 LRRIQ4A6NIV6 560 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CNOT3O75175 753 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ESRRBO95718 433 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CCNE1P24864 410 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CDK8P49336 464 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CLVS1Q8IUQ0 354 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 KLF6Q99612 283 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 SLC39A3Q9BRY0 314 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 PLS3P13797 630 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 KRT4P19013 534 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 MAP4P27816 1152 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 PMLP29590 882 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 METTL21CQ5VZV1 264 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 RAVER1Q8IY67 606 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 BHMTQ93088 406 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 FOXP1Q9H334 677 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 LIN28AQ9H9Z2 209 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 USTQ9Y2C2 406 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 SSX2IPQ9Y2D8 614 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 COL15A1P39059 1388 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 KRT8P05787 483 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 LIFRP42702 1097 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 TRPC1P48995 793 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 DPYDQ12882 1025 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
TMEM260-201ENST00000261556 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms