RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 C4BPAP04003 597 aaKnown RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 FGFR1P11362 822 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 KCNE1P15382 129 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 KLK7P49862 253 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 SCNN1GP51170 649 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 GUCY2FP51841 1108 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 ZNF697Q5TEC3 545 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 PSRC1Q6PGN9 363 aaPredicted RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 ALKAL1Q6UXT8 129 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.83■□□□□ 0.287e-12■■■■■ 33.1
GYPC-201ENST00000259254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 NPAS4Q8IUM7 802 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 CCDC150Q8NCX0 1101 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 FBXL13Q8NEE6 735 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 NEK11Q8NG66 645 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 HELQQ8TDG4 1101 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 TAS1R2Q8TE23 839 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 GBF1Q92538 1859 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 ERGIC2Q96RQ1 377 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 TSPAN18Q96SJ8 248 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.83■□□□□ 0.283e-6■■■■■ 65.1
GYPC-201ENST00000259254 FAM207AQ9NSI2 230 aaPredicted RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 TUBGCP4Q9UGJ1 667 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 GOLGA6L6A8MZA4 724 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 PTGESO14684 152 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 HOXA2O43364 376 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 UPP2O95045 317 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 POMCP01189 267 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 HLA-DRAP01903 254 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 FGBP02675 491 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 ITGB3P05106 788 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 SLC9A1P19634 815 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 PBX1P40424 430 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 KCNJ6P48051 423 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 LRMPQ12912 555 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 NCOA4Q13772 614 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 EPC2Q52LR7 807 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 XKR4Q5GH76 650 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 C15orf39Q6ZRI6 1047 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 OTOP2Q7RTS6 562 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 EHBP1Q8NDI1 1231 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
GYPC-201ENST00000259254 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 RAB20Q9NX57 234 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 SIK3Q9Y2K2 1263 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 STXBP5LQ9Y2K9 1186 aa16.82■□□□□ 0.28
GYPC-201ENST00000259254 PMM2O15305 246 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 OFD1O75665 1012 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 VNN1O95497 513 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 THP07101 528 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 TPM1P09493 284 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
GYPC-201ENST00000259254 PON1P27169 355 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 KCNMA1Q12791 1236 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 NOMO2Q5JPE7 1267 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 WDR44Q5JSH3 913 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 RASIP1Q5U651 963 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 ZNF365Q70YC5 407 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 C1orf127Q8N9H9 656 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 SEMA4DQ92854 862 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 AGAP1Q9UPQ3 857 aa16.81■□□□□ 0.28
GYPC-201ENST00000259254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.282e-7■■□□□ 11.8
GYPC-201ENST00000259254 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
GYPC-201ENST00000259254 ITIH6Q6UXX5 1313 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 POLR2BP30876 1174 aaKnown RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 MYL6P60660 151 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 RBP5P82980 135 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 APBA1Q02410 837 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 GRIK3Q13003 919 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 CLLU1OSQ5K130 101 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 CPLX3Q8WVH0 158 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 FAM161BQ96MY7 647 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 NT5C1BQ96P26 610 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 PPP1R10Q96QC0 940 aaKnown RBP16.8■□□□□ 0.28
GYPC-201ENST00000259254 PI4K2AQ9BTU6 479 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 MIOSQ9NXC5 875 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 COQ4Q9Y3A0 265 aa16.8■□□□□ 0.28
GYPC-201ENST00000259254 TMEM265A0A087WTH1 108 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 PTMAP06454 111 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms