RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 GRAMD1AQ96CP6 724 aa18.06■□□□□ 0.48
CDK4-201ENST00000257904 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
CDK4-201ENST00000257904 PIM2Q9P1W9 311 aa18.06■□□□□ 0.48
CDK4-201ENST00000257904 STK38LQ9Y2H1 464 aa18.06■□□□□ 0.48
CDK4-201ENST00000257904 R3HDM2Q9Y2K5 976 aaKnown RBP18.06■□□□□ 0.48
CDK4-201ENST00000257904 MROH7Q68CQ1 1323 aa18.06■□□□□ 0.48
CDK4-201ENST00000257904 DHX15O43143 795 aaKnown RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 TAC1P20366 129 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 SLC1A1P43005 524 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 VPS41P49754 854 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 SEPT14Q6ZU15 432 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 RELL1Q8IUW5 271 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 KIRREL3Q8IZU9 778 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 ANKLE1Q8NAG6 615 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 CHURC1Q8WUH1 139 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 DDX27Q96GQ7 796 aaKnown RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 AVENQ9NQS1 362 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 EURLQ9NYK6 297 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 TRIM33Q9UPN9 1127 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDK4-201ENST00000257904 POTEJP0CG39 1038 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 UNGP13051 313 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 RRM1P23921 792 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 KLF1Q13351 362 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 STAT4Q14765 748 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 TNIP1Q15025 636 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 TBC1D10BQ4KMP7 808 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 TMEM63BQ5T3F8 832 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 MCOLN2Q8IZK6 566 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 FAM81BQ96LP2 452 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 SH2D3AQ9BRG2 576 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 GPRC5CQ9NQ84 441 aa18.05■□□□□ 0.48
CDK4-201ENST00000257904 TOPORSQ9NS56 1045 aaPredicted RBP18.05■□□□□ 0.48
CDK4-201ENST00000257904 TCP10L2B9ZVM9 353 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 UNC5CO95185 931 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
CDK4-201ENST00000257904 FOXN2P32314 431 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 PSEN1P49768 467 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 LACTBP83111 547 aaPredicted RBP18.04■□□□□ 0.48
CDK4-201ENST00000257904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDK4-201ENST00000257904 LDHDQ86WU2 507 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 BBOF1Q8ND07 529 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 ELMO3Q96BJ8 720 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 CCDC77Q9BR77 488 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 VPS33BQ9H267 617 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDK4-201ENST00000257904 BATF3Q9NR55 127 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 ZBTB21Q9ULJ3 1066 aa18.04■□□□□ 0.48
CDK4-201ENST00000257904 COL2A1P02458 1487 aaPredicted RBP18.04■□□□□ 0.48
CDK4-201ENST00000257904 DIAPH2O60879 1101 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 LYPLA2O95372 231 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 RALAP11233 206 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 KRT5P13647 590 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ADCY1Q08828 1119 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 PTP4A2Q12974 167 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ERICH1Q86X53 443 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ANKRD35Q8N283 1001 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 CCDC89Q8N998 374 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 C9orf72Q96LT7 481 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ZNF570Q96NI8 536 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 TIPINQ9BVW5 301 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 PITPNM3Q9BZ71 974 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 EXOC7Q9UPT5 735 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 PSME4Q14997 1843 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 CLRN2A0PK11 232 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 TMEM150BA6NC51 233 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 FAM47DPA6NHR8 397 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 RASA4BC9J798 803 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 HGSO14964 777 aaPredicted RBP18.03■□□□□ 0.48
CDK4-201ENST00000257904 RASA4O43374 803 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 CALCAP01258 141 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 MYBL1P10243 752 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ATP11AP98196 1134 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 IL9RQ01113 521 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 SPP2Q13103 211 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 R3HDM1Q15032 1099 aaKnown RBP18.03■□□□□ 0.48
CDK4-201ENST00000257904 CCNG2Q16589 344 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 IZUMO3Q5VZ72 239 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 FBF1Q8TES7 1133 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 HEMGNQ9BXL5 484 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 TMOD2Q9NZR1 351 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ADAM22Q9P0K1 906 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
CDK4-201ENST00000257904 TBX20Q9UMR3 447 aa18.03■□□□□ 0.48
CDK4-201ENST00000257904 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
CDK4-201ENST00000257904 ECM2O94769 699 aaPredicted RBP18.02■□□□□ 0.48
CDK4-201ENST00000257904 ABHD2P08910 425 aa18.02■□□□□ 0.48
CDK4-201ENST00000257904 GTF2H1P32780 548 aa18.02■□□□□ 0.48
CDK4-201ENST00000257904 HSD17B4P51659 736 aa18.02■□□□□ 0.48
CDK4-201ENST00000257904 DLGAP5Q15398 846 aa18.02■□□□□ 0.48
CDK4-201ENST00000257904 MAP4K3Q8IVH8 894 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms