RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 OGTO15294 1046 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 CAND2O75155 1236 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 NFICP08651 508 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
NIP7-201ENST00000254940 MAGEA10P43363 369 aaPredicted RBP13.07□□□□□ -0.32
NIP7-201ENST00000254940 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 SLC10A6Q3KNW5 377 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 ZNF569Q5MCW4 686 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 CCDC51Q96ER9 411 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 ZMAT2Q96NC0 199 aaKnown RBP13.07□□□□□ -0.32
NIP7-201ENST00000254940 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
NIP7-201ENST00000254940 DMAC2Q9NW81 257 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 ENC1O14682 589 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 PBX3P40426 434 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 GCLMP48507 274 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
NIP7-201ENST00000254940 MEA1Q16626 185 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 C1orf220Q5T0J3 134 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 AGMOQ6ZNB7 445 aa13.07□□□□□ -0.32
NIP7-201ENST00000254940 EXTL3O43909 919 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 CXCL10P02778 98 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 MCF2P10911 925 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 ITGA4P13612 1032 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 GARTP22102 1010 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 RPL13P26373 211 aaKnown RBP13.06□□□□□ -0.32
NIP7-201ENST00000254940 SCNN1GP51170 649 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
NIP7-201ENST00000254940 ARHGAP29Q52LW3 1261 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
NIP7-201ENST00000254940 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 ECHDC2Q86YB7 292 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 OR5B17Q8NGF7 314 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 RPF1Q9H9Y2 349 aaKnown RBP13.06□□□□□ -0.32
NIP7-201ENST00000254940 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 CPSF3Q9UKF6 684 aaKnown RBP13.06□□□□□ -0.32
NIP7-201ENST00000254940 STYXL1Q9Y6J8 313 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 TTC3P53804 2025 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
NIP7-201ENST00000254940 ZNF233A6NK53 670 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 C9IYK1 514 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 F8W810 466 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CTIFO43310 598 aaKnown RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 CALCAP01258 141 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 EPB41P11171 864 aaKnown RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 TNNI1P19237 187 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 PSMC2P35998 433 aaKnown RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 IKBKEQ14164 716 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 EFCAB13Q8IY85 973 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 RGS18Q9NS28 235 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 DYNC1I1O14576 645 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CASQ1P31415 396 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 EIF4A3P38919 411 aaKnown RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 RABGGTBP53611 331 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CLLU1OSQ5K130 101 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CNKSR3Q6P9H4 555 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 ZNF516Q92618 1163 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 NUP58Q9BVL2 599 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 MTMR12Q9C0I1 747 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
NIP7-201ENST00000254940 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 CHD9Q3L8U1 2897 aa13.05□□□□□ -0.32
NIP7-201ENST00000254940 MACROD2A1Z1Q3 448 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 PPEF2O14830 753 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 B4GALT3O60512 393 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 FGBP02675 491 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 MARSP56192 900 aaKnown RBP13.04□□□□□ -0.32
NIP7-201ENST00000254940 ERCC6LQ2NKX8 1250 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 SLC24A5Q71RS6 500 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 PAAF1Q9BRP4 392 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 PI4K2AQ9BTU6 479 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 A0A0U1RQF3 1178 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
NIP7-201ENST00000254940 CCP110O43303 1012 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms