RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CATSPER4Q7RTX7 472 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 NOP9Q86U38 636 aaKnown RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 RPUSD2Q8IZ73 545 aaKnown RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 TMEM40Q8WWA1 233 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 XPNPEP3Q9NQH7 507 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 TAS2R14Q9NYV8 317 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 NUB1Q9Y5A7 615 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 LACTBL1A8MY62 500 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 ADAMTS4O75173 837 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 ANXA13P27216 316 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 SURF1Q15526 300 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 DUOXA2Q1HG44 320 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 NBPF20Q3BBV1 942 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 EPS8L1Q8TE68 723 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
TRIM47-201ENST00000254816 NFICP08651 508 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 MYL6P60660 151 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 NOP14P78316 857 aaKnown RBP20.3■□□□□ 0.84
TRIM47-201ENST00000254816 C10orf76Q5T2E6 689 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 TXLNBQ8N3L3 684 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 B4GALT4O60513 344 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 TACC1O75410 805 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 CLTAP09496 248 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 DARSP14868 501 aaKnown RBP20.3■□□□□ 0.84
TRIM47-201ENST00000254816 CHRNB2P17787 502 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 HOXA11P31270 313 aaPredicted RBP20.3■□□□□ 0.84
TRIM47-201ENST00000254816 HOXC8P31273 242 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 AP3M2P53677 418 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 CC2D1AQ6P1N0 951 aaPredicted RBP20.3■□□□□ 0.84
TRIM47-201ENST00000254816 CEP112Q8N8E3 955 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 CFHR5Q9BXR6 569 aa20.3■□□□□ 0.84
TRIM47-201ENST00000254816 NOCTQ9UK39 431 aaKnown RBP20.3■□□□□ 0.84
TRIM47-201ENST00000254816 KPNA6O60684 536 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 NPTXRO95502 500 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 YY1P25490 414 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 SLC10A6Q3KNW5 377 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 FAM47CQ5HY64 1035 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 ADPGKQ9BRR6 497 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 THSD7BQ9C0I4 1608 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 MMEP08473 750 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 GNAT1P11488 350 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 CYP11B1P15538 503 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 CDC42EP1Q00587 391 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 CUL2Q13617 745 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 JADE1Q6IE81 842 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 ENOSF1Q7L5Y1 443 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 ANKRD36BP1Q96IX9 119 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 PCDHB18PQ96TA0 734 aa20.29■□□□□ 0.84
TRIM47-201ENST00000254816 IL18RAPO95256 599 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 ASGR1P07306 291 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 H2AFZP0C0S5 128 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 EIF4BP23588 611 aaKnown RBP20.28■□□□□ 0.84
TRIM47-201ENST00000254816 PLA2G4AP47712 749 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 GALCP54803 685 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 SNX17Q15036 470 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 KCNA10Q16322 511 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 GDF6Q6KF10 455 aaPredicted RBP20.28■□□□□ 0.84
TRIM47-201ENST00000254816 H2AFVQ71UI9 128 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 TRIM58Q8NG06 486 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 NOX5Q96PH1 765 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 EIF2AQ9BY44 585 aaKnown RBP20.28■□□□□ 0.84
TRIM47-201ENST00000254816 ANKZF1Q9H8Y5 726 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 GTF2IRD1Q9UHL9 959 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 SASH3O75995 380 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 TNNC2P02585 160 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 ABCB4P21439 1286 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 MAP2K2P36507 400 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 AMPD2Q01433 879 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 TRPC3Q13507 836 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 RAET1EQ8TD07 263 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 CXCL16Q9H2A7 254 aa20.28■□□□□ 0.84
TRIM47-201ENST00000254816 SRGAP2O75044 1071 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 ASS1P00966 412 aaKnown RBP20.27■□□□□ 0.84
TRIM47-201ENST00000254816 KRT19P08727 400 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 ACO1P21399 889 aaKnown RBP20.27■□□□□ 0.84
TRIM47-201ENST00000254816 HOXD10P28358 340 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 PDE6CP51160 858 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 ACAP3Q96P50 834 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 IMPG2Q9BZV3 1241 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 HES2Q9Y543 173 aa20.27■□□□□ 0.84
TRIM47-201ENST00000254816 RALGAPA2Q2PPJ7 1873 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 HMGCRP04035 888 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 FMO1Q01740 532 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 RNF10Q8N5U6 811 aaKnown RBP20.27■□□□□ 0.83
TRIM47-201ENST00000254816 WNT8BQ93098 351 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 ALS2CR12Q96Q35 445 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 PNKPQ96T60 521 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 SNTG2Q9NY99 539 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 PCDHB4Q9Y5E5 795 aa20.27■□□□□ 0.83
TRIM47-201ENST00000254816 MROH7Q68CQ1 1323 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 PALMO75781 387 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 RHOXF2BP0C7M4 288 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 GUCY2FP51841 1108 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 SLC27A1Q6PCB7 646 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 KLHDC9Q8NEP7 349 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 FAM81BQ96LP2 452 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 RHOXF2Q9BQY4 288 aa20.26■□□□□ 0.83
TRIM47-201ENST00000254816 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms