RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 NFIAQ12857 509 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PLS1Q14651 629 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 TRIP10Q15642 601 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 RFWD3Q6PCD5 774 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 BEND5Q7L4P6 421 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 RRAGAQ7L523 313 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 ALKBH8Q96BT7 664 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 LTV1Q96GA3 475 aaPredicted RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 ERP44Q9BS26 406 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KCTD10Q9H3F6 313 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 UCKL1Q9NWZ5 548 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 H7C0C1 242 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 CRYZL1O95825 349 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PRLP01236 227 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CIITAP33076 1130 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PTGS2P35354 604 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CLK3P49761 638 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 SLC12A2P55011 1212 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 TFAP4Q01664 338 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 SPIDRQ14159 915 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 EEPD1Q7L9B9 569 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PEX26Q7Z412 305 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 METTL3Q86U44 580 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 TOR1AIP2Q8NFQ8 470 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 OR8H1Q8NGG4 311 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 GRAMD1AQ96CP6 724 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 VPS37BQ9H9H4 285 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 UBN1Q9NPG3 1134 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 VPS54Q9P1Q0 977 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 AK5Q9Y6K8 562 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 UMODL1Q5DID0 1318 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 A0A0G2JND7 137 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 SH3PXD2BA1X283 911 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 MAN1A2O60476 641 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KCNJ13O60928 360 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 RGS20O76081 388 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 ZWINTO95229 277 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KRT7P08729 469 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 BMP6P22004 513 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KRT2P35908 639 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CPA2P48052 419 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 NUP107P57740 925 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 HAND2P61296 217 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 IRX4P78413 519 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CYP4A11Q02928 519 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CETN1Q12798 172 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 MOGSQ13724 837 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 TAF1BQ53T94 588 aaPredicted RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 C4orf22Q6V702 233 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 RFPL4BQ6ZWI9 263 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 SH3BP5LQ7L8J4 393 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 FASTKD5Q7L8L6 764 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 ENDOVQ8N8Q3 282 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 SLC26A7Q8TE54 656 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PYROXD1Q8WU10 500 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 TTPALQ9BTX7 342 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 MTMR12Q9C0I1 747 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 MTFR1LQ9H019 292 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KCNMB3Q9NPA1 279 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 AGPAT5Q9NUQ2 364 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 HERC5Q9UII4 1024 aaKnown RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 DAPK2Q9UIK4 370 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CCDC162PA2VCL2 907 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PSMD11O00231 422 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PGRMC1O00264 195 aaKnown RBP8.07□□□□□ -1.12
USP29-201ENST00000254181 DNM2P50570 870 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 CHN2P52757 468 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 BLVRAP53004 296 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 YWHAGP61981 247 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP29-201ENST00000254181 PLCB3Q01970 1234 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PDK3Q15120 406 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 WDR72Q3MJ13 1102 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 TCP11X2Q5H9J9 407 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 RABGAP1LQ5R372 815 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 ITPRIPL1Q6GPH6 555 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PLEKHA7Q6IQ23 1121 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 C4orf50Q6ZRC1 276 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 SRRM1Q8IYB3 904 aaKnown RBP8.07□□□□□ -1.12
USP29-201ENST00000254181 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PLEKHO2Q8TD55 490 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 NCSTNQ92542 709 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 EBF3Q9H4W6 596 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 CAAP1Q9H8G2 361 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 C8orf4Q9NR00 106 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 DDX28Q9NUL7 540 aaKnown RBP8.07□□□□□ -1.12
USP29-201ENST00000254181 DMTF1Q9Y222 760 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 KIAA0232Q92628 1395 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 ABCC12Q96J65 1359 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 A2MP01023 1474 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 ZNF518AQ6AHZ1 1483 aa8.07□□□□□ -1.12
USP29-201ENST00000254181 PPP6R2O75170 966 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms