RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RPF1Q9H9Y2 349 aaKnown RBP25■■□□□ 1.59
LSM4-201ENST00000252816 FAM13BQ9NYF5 915 aa25■■□□□ 1.59
LSM4-201ENST00000252816 PDCD11Q14690 1871 aaKnown RBP25■■□□□ 1.59
LSM4-201ENST00000252816 ADAM12O43184 909 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 TGM5O43548 720 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 TKTP29401 623 aaKnown RBP24.99■■□□□ 1.59
LSM4-201ENST00000252816 ACOT2P49753 483 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 KRT85P78386 507 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 CREMQ03060 361 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 PPP2R3AQ06190 1150 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 ADALQ6DHV7 355 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 SLFN12LQ6IEE8 588 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 LILRA6Q6PI73 481 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 KIF12Q96FN5 646 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 ACCSQ96QU6 501 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 LRRC27Q9C0I9 530 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 AGO2Q9UKV8 859 aaKnown RBP24.99■■□□□ 1.59
LSM4-201ENST00000252816 PCDHB13Q9Y5F0 798 aa24.99■■□□□ 1.59
LSM4-201ENST00000252816 PI4K2BG5E9Z4 385 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 MTHFRP42898 656 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 ASIC1P78348 528 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 AMPD3Q01432 767 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 CNNM4Q6P4Q7 775 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 GLIS3Q8NEA6 775 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 NECTIN4Q96NY8 510 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 C7orf25Q9BPX7 421 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 KCNH3Q9ULD8 1083 aa24.98■■□□□ 1.59
LSM4-201ENST00000252816 SPDYE4A6NLX3 237 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 TRAPPC3O43617 180 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 PRPF6O94906 941 aaKnown RBP24.97■■□□□ 1.59
LSM4-201ENST00000252816 C1RP00736 705 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 SP100P23497 879 aaPredicted RBP24.97■■□□□ 1.59
LSM4-201ENST00000252816 CASP1P29466 404 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 GUCY2FP51841 1108 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 ALCAMQ13740 583 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 GPR149Q86SP6 731 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 RNF135Q8IUD6 432 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 POMGNT1Q8WZA1 660 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 FAM212AQ96EL1 285 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 SPATA32Q96LK8 384 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 RIPOR3Q96MK2 946 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 MAGEF1Q9HAY2 307 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 EXOC7Q9UPT5 735 aa24.97■■□□□ 1.59
LSM4-201ENST00000252816 RFPL2O75678 378 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 LRPAP1P30533 357 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 ATAT1Q5SQI0 421 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 PDXDC1Q6P996 788 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 CRELD2Q6UXH1 353 aaPredicted RBP24.96■■□□□ 1.59
LSM4-201ENST00000252816 RSPO2Q6UXX9 243 aaPredicted RBP24.96■■□□□ 1.59
LSM4-201ENST00000252816 ZSWIM2Q8NEG5 633 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 CMASQ8NFW8 434 aaPredicted RBP24.96■■□□□ 1.59
LSM4-201ENST00000252816 MTRRQ9UBK8 725 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 UBQLN1Q9UMX0 589 aaKnown RBP24.96■■□□□ 1.59
LSM4-201ENST00000252816 NUB1Q9Y5A7 615 aa24.96■■□□□ 1.59
LSM4-201ENST00000252816 NFICP08651 508 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 CYP3A5P20815 502 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 CMA1P23946 247 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 POSTNQ15063 836 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 JADE1Q6IE81 842 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 GRAMD1CQ8IYS0 662 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 SYCP3Q8IZU3 236 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 KREMEN2Q8NCW0 462 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 HDAC7Q8WUI4 952 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 BLZF1Q9H2G9 400 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 PLEKHA4Q9H4M7 779 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 SERTAD1Q9UHV2 236 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 MUTYHQ9UIF7 546 aa24.95■■□□□ 1.58
LSM4-201ENST00000252816 TRIOO75962 3097 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.94■■□□□ 1.58
LSM4-201ENST00000252816 CCDC195A0A1B0GUA6 201 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 A0A1B0GVL5 298 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 ACTN4O43707 911 aaKnown RBP24.94■■□□□ 1.58
LSM4-201ENST00000252816 PFKFB1P16118 471 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 AFMP43652 599 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 CD302Q8IX05 232 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 SUSD3Q96L08 255 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 TSPAN18Q96SJ8 248 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 TSHZ2Q9NRE2 1034 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 DPP7Q9UHL4 492 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 ATP6V1DQ9Y5K8 247 aa24.94■■□□□ 1.58
LSM4-201ENST00000252816 SYN3O14994 580 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 DCXO43602 365 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 MCM4P33991 863 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 OR1D2P34982 312 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 HOXD13P35453 343 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 EHHADHQ08426 723 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 CUL4BQ13620 913 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 RAB33AQ14088 237 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 VARS2Q5ST30 1063 aaKnown RBP24.93■■□□□ 1.58
LSM4-201ENST00000252816 SPATA1Q5VX52 437 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 ELMSAN1Q6PJG2 1045 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 C15orf39Q6ZRI6 1047 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 ANKS3Q6ZW76 656 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 UNC13DQ70J99 1090 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 ZNF707Q96C28 371 aaPredicted RBP24.93■■□□□ 1.58
LSM4-201ENST00000252816 PYM1Q9BRP8 204 aaKnown RBP24.93■■□□□ 1.58
LSM4-201ENST00000252816 CBWD1Q9BRT8 395 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 C11orf16Q9NQ32 467 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 FBXW11Q9UKB1 542 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 HPSEQ9Y251 543 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms