RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 NCOA4Q13772 614 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 PPP2R5EQ16537 467 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 TTC27Q6P3X3 843 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 LRRC31Q6UY01 552 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 ZNF677Q86XU0 584 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 CD302Q8IX05 232 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 DHX37Q8IY37 1157 aaKnown RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 OR2W6PQ8NHA6 318 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 MAGOHBQ96A72 148 aaKnown RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 RAB17Q9H0T7 212 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 MROH7Q68CQ1 1323 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 PHF2O75151 1096 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 LGR5O75473 907 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 TOM1L1O75674 476 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 CYP1A1P04798 512 aaPredicted RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 CLTAP09496 248 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 CTNNA2P26232 953 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 EFNA5P52803 228 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 PLCB4Q15147 1175 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 DUPD1Q68J44 220 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 JAMLQ86YT9 394 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 LRRC45Q96CN5 670 aa23.17■■□□□ 1.3
CLN6-201ENST00000249806 MPHOSPH6Q99547 160 aaKnown RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 ACO2Q99798 780 aaKnown RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 MRPL4Q9BYD3 311 aaKnown RBP23.17■■□□□ 1.3
CLN6-201ENST00000249806 GNA15P30679 374 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 NSFP46459 744 aaKnown RBP23.16■■□□□ 1.3
CLN6-201ENST00000249806 CEP85LQ5SZL2 805 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 GPAT2Q6NUI2 795 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 CCDC62Q6P9F0 684 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 RHPN2Q8IUC4 686 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 YBX3P16989 372 aaKnown RBP eCLIP23.16■■□□□ 1.31e-7■■□□□ 13.8
CLN6-201ENST00000249806 PTGIRP43119 386 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 RWDD2BP57060 319 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 CENPCQ03188 943 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 DHX34Q14147 1143 aaKnown RBP23.16■■□□□ 1.3
CLN6-201ENST00000249806 SLC13A5Q86YT5 568 aaPredicted RBP23.16■■□□□ 1.3
CLN6-201ENST00000249806 BRSK2Q8IWQ3 736 aa23.16■■□□□ 1.3
CLN6-201ENST00000249806 IGKV6-21A0A0C4DH24 114 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 H0YGN5 161 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 PRKCBP05771 671 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 MXD4Q14582 209 aaPredicted RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 MAPK6Q16659 721 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 DAB2IPQ5VWQ8 1189 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 CDCA2Q69YH5 1023 aaPredicted RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 TTC19Q6DKK2 380 aaPredicted RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 KCNV1Q6PIU1 500 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 PLPPR4Q7Z2D5 763 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 TMC3Q7Z5M5 1100 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 RBBP8NLQ8NC74 664 aaPredicted RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 UBLCP1Q8WVY7 318 aaPredicted RBP23.15■■□□□ 1.3
CLN6-201ENST00000249806 MTMR12Q9C0I1 747 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 SNX24Q9Y343 169 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 NFS1Q9Y697 457 aa23.15■■□□□ 1.3
CLN6-201ENST00000249806 RARAP10276 462 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 HSPA6P17066 643 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 OSBPP22059 807 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 CHRNA3P32297 505 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 DHX9Q08211 1270 aaKnown RBP23.14■■□□□ 1.3
CLN6-201ENST00000249806 FOXR1Q6PIV2 292 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 CCDC137Q6PK04 289 aaKnown RBP23.14■■□□□ 1.3
CLN6-201ENST00000249806 CDR2LQ86X02 465 aaPredicted RBP23.14■■□□□ 1.3
CLN6-201ENST00000249806 TCP11Q8WWU5 503 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 UPF1Q92900 1129 aaKnown RBP eCLIP23.14■■□□□ 1.31e-7■■■■■ 31.9
CLN6-201ENST00000249806 C11orf70Q9BRQ4 267 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 AVENQ9NQS1 362 aaPredicted RBP23.14■■□□□ 1.3
CLN6-201ENST00000249806 CALCOCO1Q9P1Z2 691 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 EVPLQ92817 2033 aa23.14■■□□□ 1.3
CLN6-201ENST00000249806 FAM187AA6NFU0 413 aa23.14■■□□□ 1.29
CLN6-201ENST00000249806 CYP2C8P10632 490 aa23.14■■□□□ 1.29
CLN6-201ENST00000249806 SIX1Q15475 284 aaPredicted RBP23.14■■□□□ 1.29
CLN6-201ENST00000249806 MON1BQ7L1V2 547 aa23.14■■□□□ 1.29
CLN6-201ENST00000249806 ABRAQ8N0Z2 381 aa23.14■■□□□ 1.29
CLN6-201ENST00000249806 EFCC1Q9HA90 598 aa23.14■■□□□ 1.29
CLN6-201ENST00000249806 ABLIM1O14639 778 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 SHOX2O60902 331 aaPredicted RBP23.13■■□□□ 1.29
CLN6-201ENST00000249806 TBXAS1P24557 533 aaPredicted RBP23.13■■□□□ 1.29
CLN6-201ENST00000249806 GJA5P36382 358 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 FASTKD5Q7L8L6 764 aaKnown RBP23.13■■□□□ 1.29
CLN6-201ENST00000249806 ZBTB8OSQ8IWT0 167 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 FMO2Q99518 471 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 ZDHHC18Q9NUE0 388 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 PCYOX1Q9UHG3 505 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 THAP12O43422 761 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 KCNJ1P48048 391 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 PLTPP55058 493 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 NOMO3P69849 1222 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.13■■□□□ 1.29
CLN6-201ENST00000249806 WDR49Q8IV35 697 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 CAPS2Q9BXY5 557 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.13■■□□□ 1.29
CLN6-201ENST00000249806 CNTN6Q9UQ52 1028 aa23.13■■□□□ 1.29
CLN6-201ENST00000249806 MYO1FO00160 1098 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 OGTO15294 1046 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 B4GALT5O43286 388 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 MYBL1P10243 752 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms