RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 VNN1O95497 513 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 NSFP46459 744 aaKnown RBP27.24■■□□□ 1.95
RAB40C-201ENST00000248139 GTF2A1P52655 376 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-201ENST00000248139 GCNT1Q02742 428 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 DDX27Q96GQ7 796 aaKnown RBP27.24■■□□□ 1.95
RAB40C-201ENST00000248139 PDLIM7Q9NR12 457 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 EDN1P05305 212 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 IVDP26440 423 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 CDR1P51861 262 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 BRDTQ58F21 947 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-201ENST00000248139 C12orf50Q8NA57 414 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-201ENST00000248139 SLC40A1Q9NP59 571 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 CD2APQ9Y5K6 639 aa27.24■■□□□ 1.95
RAB40C-201ENST00000248139 WDR81Q562E7 1941 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 AGTP01019 485 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 TCF4P15884 667 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 ADCY8P40145 1251 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 SLC17A8Q8NDX2 589 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 IPO4Q8TEX9 1081 aaKnown RBP27.23■■□□□ 1.95
RAB40C-201ENST00000248139 IFT74Q96LB3 600 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 SLC9A2Q9UBY0 812 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 GGA2Q9UJY4 613 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 LRRIQ4A6NIV6 560 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 PI4K2BG5E9Z4 385 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 DGAT1O75907 488 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 C15orf39Q6ZRI6 1047 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 ANKRD42Q8N9B4 389 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 CEP89Q96ST8 783 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 ATP6V0A4Q9HBG4 840 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 CD248Q9HCU0 757 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 ARHGAP28Q9P2N2 729 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 PCDHB4Q9Y5E5 795 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 PCDHB2Q9Y5E7 798 aa27.23■■□□□ 1.95
RAB40C-201ENST00000248139 PSAPP07602 524 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 TMEM132BQ14DG7 1078 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 WDR44Q5JSH3 913 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 CRELD2Q6UXH1 353 aaPredicted RBP27.22■■□□□ 1.95
RAB40C-201ENST00000248139 ASAP3Q8TDY4 903 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 TARS2Q9BW92 718 aaKnown RBP27.22■■□□□ 1.95
RAB40C-201ENST00000248139 DCLK3Q9C098 648 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 HACL1Q9UJ83 578 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 ATP4AP20648 1035 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 SCTRP47872 440 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 OR5B17Q8NGF7 314 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 HVCN1Q96D96 273 aa27.22■■□□□ 1.95
RAB40C-201ENST00000248139 AGO2Q9UKV8 859 aaKnown RBP27.22■■□□□ 1.95
RAB40C-201ENST00000248139 C4BPAP04003 597 aaKnown RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 IBSPP21815 317 aaPredicted RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 GTF2H1P32780 548 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 POLGP54098 1239 aaPredicted RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 BACE1P56817 501 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 CNGA2Q16280 664 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 ZACNQ401N2 412 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 KAZNQ674X7 775 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 CCT6BQ92526 530 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 ARHGEF2Q92974 986 aaKnown RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 CENPTQ96BT3 561 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 GPRASP2Q96D09 838 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 MAP3K20Q9NYL2 800 aaKnown RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 TTLL13PA6NNM8 815 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 EXTL3O43909 919 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 GARTP22102 1010 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 HP1BP3Q5SSJ5 553 aaPredicted RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 RHBDF2Q6PJF5 856 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 USP37Q86T82 979 aa27.21■■□□□ 1.95
RAB40C-201ENST00000248139 ACSF2Q96CM8 615 aaPredicted RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 ZNF214Q9UL59 606 aaPredicted RBP27.21■■□□□ 1.95
RAB40C-201ENST00000248139 KRT10P13645 584 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 ZFYVE27Q5T4F4 411 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 ABHD15Q6UXT9 468 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 CYP4X1Q8N118 509 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 CCDC197Q8NCU1 140 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 MCPH1Q8NEM0 835 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 NSUN6Q8TEA1 469 aaKnown RBP27.2■■□□□ 1.95
RAB40C-201ENST00000248139 C9orf72Q96LT7 481 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 KCNK9Q9NPC2 374 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 A1CFQ9NQ94 594 aaKnown RBP27.2■■□□□ 1.95
RAB40C-201ENST00000248139 ADAM22Q9P0K1 906 aa27.2■■□□□ 1.95
RAB40C-201ENST00000248139 GH1P01241 217 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 GBP1P32455 592 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 PRKG1Q13976 671 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 EMC2Q15006 297 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 MON1BQ7L1V2 547 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 C3orf20Q8ND61 904 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 FBXO40Q9UH90 709 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 GJA3Q9Y6H8 435 aa27.2■■□□□ 1.94
RAB40C-201ENST00000248139 CETPP11597 493 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 ACO1P21399 889 aaKnown RBP27.19■■□□□ 1.94
RAB40C-201ENST00000248139 MCCD1P59942 119 aaPredicted RBP27.19■■□□□ 1.94
RAB40C-201ENST00000248139 ZNF394Q53GI3 561 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 SUGP1Q8IWZ8 645 aaKnown RBP27.19■■□□□ 1.94
RAB40C-201ENST00000248139 GDAP1Q8TB36 358 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 SNF8Q96H20 258 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 WRNIP1Q96S55 665 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 KLC4Q9NSK0 619 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 RBAKQ9NYW8 714 aaPredicted RBP27.19■■□□□ 1.94
RAB40C-201ENST00000248139 ANAPC5Q9UJX4 755 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 NUB1Q9Y5A7 615 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 GNA15P30679 374 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 RPL7AP62424 266 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms