RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 XRRA1Q6P2D8 792 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 C15orf39Q6ZRI6 1047 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 CCDC60Q8IWA6 550 aaPredicted RBP15.35■□□□□ 0.05
HIF3A-202ENST00000244303 C12orf42Q96LP6 360 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 PDLIM7Q9NR12 457 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 AAASQ9NRG9 546 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 WHRNQ9P202 907 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 ASIC3Q9UHC3 531 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 ADAMTS5Q9UNA0 930 aa15.35■□□□□ 0.05
HIF3A-202ENST00000244303 RGS20O76081 388 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PLCB4Q15147 1175 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ZNF568Q3ZCX4 644 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 CCDC38Q502W7 563 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 TNFAIP8L3Q5GJ75 292 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 MCPH1Q8NEM0 835 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ACTR5Q9H9F9 607 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 AVENQ9NQS1 362 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 INTS9Q9NV88 658 aaKnown RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 LOC102724159A0A0B4J2E5 919 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 C19orf81C9J6K1 198 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 DNM1LO00429 736 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ACSL3O95573 720 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PSAPP07602 524 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 CHKAP35790 457 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 WNT7BP56706 349 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PRKCEQ02156 737 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PWP2Q15269 919 aaKnown RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 TRMT10CQ7L0Y3 403 aaKnown RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ATP6V0A4Q9HBG4 840 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 CYP26B1Q9NR63 512 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 ARHGAP28Q9P2N2 729 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
HIF3A-202ENST00000244303 MAFGO15525 162 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 TNNI1P19237 187 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 LIG4P49917 911 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 OAZ1P54368 228 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 TRIP13Q15645 432 aaPredicted RBP15.33■□□□□ 0.05
HIF3A-202ENST00000244303 LONRF1Q17RB8 773 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 SPOPLQ6IQ16 392 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 RHBDF2Q6PJF5 856 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 IFT74Q96LB3 600 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 CCDC114Q96M63 670 aa15.33■□□□□ 0.05
HIF3A-202ENST00000244303 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.05
HIF3A-202ENST00000244303 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.05
HIF3A-202ENST00000244303 ZNF214Q9UL59 606 aaPredicted RBP15.33■□□□□ 0.05
HIF3A-202ENST00000244303 EXTL3O43909 919 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 HLA-DRAP01903 254 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 MYBL1P10243 752 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 NSFP46459 744 aaKnown RBP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 RTP1P59025 263 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 NLRP11P59045 1033 aaKnown RBP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 ENPEPQ07075 957 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 TMEM132BQ14DG7 1078 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 MFSD5Q6N075 450 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 ZNF677Q86XU0 584 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 LRRC34Q8IZ02 419 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 KLRG1Q96E93 195 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 DDX27Q96GQ7 796 aaKnown RBP15.33■□□□□ 0.04
HIF3A-202ENST00000244303 SNF8Q96H20 258 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 FAM81BQ96LP2 452 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 FNBP1Q96RU3 617 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 DCLK3Q9C098 648 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 SLC9A2Q9UBY0 812 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 PTPRJQ12913 1337 aa15.33■□□□□ 0.04
HIF3A-202ENST00000244303 SIP14410 1827 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 O00370 1275 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ATP2C2O75185 946 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CYP1A1P04798 512 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CFHP08603 1231 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ITIH2P19823 946 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 IVDP26440 423 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 PIK3CAP42336 1068 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 SLC1A1P43005 524 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ACOT2P49753 483 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CLDN10P78369 228 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CENPCQ03188 943 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 PTK6Q13882 451 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 PSMD6Q15008 389 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ZACNQ401N2 412 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CATSPERGQ6ZRH7 1159 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 TAOK1Q7L7X3 1001 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 EXOC3L1Q86VI1 746 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CCDC197Q8NCU1 140 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CCT6BQ92526 530 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 TRIM11Q96F44 468 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ROPN1BQ9BZX4 212 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms