RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 PLEKHA4Q9H4M7 779 aa13.62□□□□□ -0.23
SNAI1-201ENST00000244050 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
SNAI1-201ENST00000244050 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.62□□□□□ -0.23
SNAI1-201ENST00000244050 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
SNAI1-201ENST00000244050 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 LGR5O75473 907 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
SNAI1-201ENST00000244050 CYP1A2P05177 515 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 CYP11B1P15538 503 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 GCNT1Q02742 428 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 TTMPQ5BVD1 217 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 TMEM63BQ5T3F8 832 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 EMC10Q5UCC4 262 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 LRIG3Q6UXM1 1119 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
SNAI1-201ENST00000244050 ALG3Q92685 438 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 TMEM143Q96AN5 459 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 MAML3Q96JK9 1138 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 POP1Q99575 1024 aaKnown RBP13.61□□□□□ -0.23
SNAI1-201ENST00000244050 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 FAM114A2Q9NRY5 505 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 AMACRQ9UHK6 382 aa13.61□□□□□ -0.23
SNAI1-201ENST00000244050 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 EXTL3O43909 919 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 GNRH1P01148 92 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 PIGRP01833 764 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 SKOR1P84550 965 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 MTFR1Q15390 333 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 TARBP2Q15633 366 aaKnown RBP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 MAMDC4Q6UXC1 1216 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 PLPPR4Q7Z2D5 763 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 UVRAGQ9P2Y5 699 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 GTF3C4Q9UKN8 822 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 UTP11Q9Y3A2 253 aaKnown RBP13.6□□□□□ -0.23
SNAI1-201ENST00000244050 SIP14410 1827 aa13.6□□□□□ -0.23
SNAI1-201ENST00000244050 FAM187AA6NFU0 413 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SLC15A5A6NIM6 579 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 MMEP08473 750 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 NAMPTP43490 491 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PEX5P50542 639 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PDE6CP51160 858 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PRMT2P55345 433 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 LAMC2Q13753 1193 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PSMD6Q15008 389 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PSPC1Q8WXF1 523 aaKnown RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 CD101Q93033 1021 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 RAB17Q9H0T7 212 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PPME1Q9Y570 386 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 LRRIQ4A6NIV6 560 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 TTI1O43156 1089 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 MAFO75444 373 aaPredicted RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SNAI1O95863 264 aaPredicted RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 GH1P01241 217 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 COMTP21964 271 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 CTNNA2P26232 953 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 PSMC4P43686 418 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 LIG4P49917 911 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SLC26A2P50443 739 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 DHX34Q14147 1143 aaKnown RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 GJC2Q5T442 439 aaPredicted RBP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 ACAD10Q6JQN1 1059 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNAI1-201ENST00000244050 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 DEPTORQ8TB45 409 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 TATDN2Q93075 761 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 BICD1Q96G01 975 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 FAM213AQ9BRX8 229 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
SNAI1-201ENST00000244050 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
SNAI1-201ENST00000244050 DAPK3O43293 454 aa13.58□□□□□ -0.24
SNAI1-201ENST00000244050 KRT14P02533 472 aa13.58□□□□□ -0.24
SNAI1-201ENST00000244050 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms