RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ANKRD36BP1Q96IX9 119 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 ATP8B3O60423 1300 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
HDHD3-201ENST00000238379 URI1O94763 535 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 INHAP05111 366 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 CHRNB2P17787 502 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 ACO1P21399 889 aaKnown RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 TNFAIP3P21580 790 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 PRMT2P55345 433 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 MRPS6P82932 125 aaKnown RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 APBB1IPQ7Z5R6 666 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 RNF180Q86T96 592 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 SLC47A2Q86VL8 602 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 CYP11B1P15538 503 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 TRPC3Q13507 836 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 RPAINQ86UA6 219 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 DNAAF5Q86Y56 855 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 PALB2Q86YC2 1186 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 C1orf127Q8N9H9 656 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-201ENST00000238379 XYLT2Q9H1B5 865 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
HDHD3-201ENST00000238379 BTNL10A8MVZ5 291 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 ACLYP53396 1101 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 LHX8Q68G74 356 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 RSPH3Q86UC2 560 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 RPUSD2Q8IZ73 545 aaKnown RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 RNF10Q8N5U6 811 aaKnown RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 DDX1Q92499 740 aaKnown RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 HMX1Q9NP08 348 aaPredicted RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 SIX4Q9UIU6 781 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 CNTN6Q9UQ52 1028 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 PIN4Q9Y237 131 aaKnown RBP16.34■□□□□ 0.21
HDHD3-201ENST00000238379 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
HDHD3-201ENST00000238379 CABYRO75952 493 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 MOCS3O95396 460 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 H2AFZP0C0S5 128 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 KRT5P13647 590 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 GRK4P32298 578 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 UBXN11Q5T124 520 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 H2AFVQ71UI9 128 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 CD302Q8IX05 232 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 TRIM58Q8NG06 486 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 PLEKHA5Q9HAU0 1116 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 SNTG2Q9NY99 539 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.21
HDHD3-201ENST00000238379 C2CD2Q9Y426 696 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.21
HDHD3-201ENST00000238379 TACC1O75410 805 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 CHRNA1P02708 482 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 GTF2F1P35269 517 aaKnown RBP eCLIP16.33■□□□□ 0.2
HDHD3-201ENST00000238379 CDR2Q01850 454 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 ITGA7Q13683 1181 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 TMEM132DQ14C87 1099 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 UBR7Q8N806 425 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 NOX5Q96PH1 765 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 PCDHB18PQ96TA0 734 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 NIF3L1Q9GZT8 377 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 TAS2R14Q9NYV8 317 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 HES2Q9Y543 173 aa16.33■□□□□ 0.2
HDHD3-201ENST00000238379 UQCRHLA0A096LP55 91 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 M0QZ92 97 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 BUB1O43683 1085 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
HDHD3-201ENST00000238379 UQCRHP07919 91 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 MMEP08473 750 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 PDE6CP51160 858 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 GALCP54803 685 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 FMO1Q01740 532 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 PTGISQ16647 500 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 TAF3Q5VWG9 929 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 TMEM130Q8N3G9 435 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 TAF4BQ92750 862 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 SNX27Q96L92 541 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 SENP6Q9GZR1 1112 aaPredicted RBP16.32■□□□□ 0.2
HDHD3-201ENST00000238379 CXCL16Q9H2A7 254 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
HDHD3-201ENST00000238379 SEPT11Q9NVA2 429 aaKnown RBP16.32■□□□□ 0.2
HDHD3-201ENST00000238379 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
HDHD3-201ENST00000238379 ITGB3P05106 788 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 BPIFB4P59827 614 aa16.31■□□□□ 0.2
HDHD3-201ENST00000238379 MGAT3Q09327 533 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms