RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RCAN1P53805 252 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 IDI1Q13907 227 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CYB5R4Q7L1T6 521 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 ATP8A2Q9NTI2 1148 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 MFN2O95140 757 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CYP2J2P51589 502 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 NPEPPSP55786 919 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 EGFLAMQ63HQ2 1017 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CCDC90BQ9GZT6 254 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CRCPO75575 148 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 S100A5P33763 92 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CCNG1P51959 295 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 GALCP54803 685 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 CDK16Q00536 496 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
VAMP4-201ENST00000236192 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-201ENST00000236192 PUS7LQ9H0K6 701 aaKnown RBP13.55□□□□□ -0.24
VAMP4-201ENST00000236192 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
VAMP4-201ENST00000236192 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
VAMP4-201ENST00000236192 A0A087WXM4 84 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 LRRN2O75325 713 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 IL10P22301 178 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 CASP5P51878 434 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 BPIFB4P59827 614 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 ADAM17P78536 824 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 LSAMPQ13449 338 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 CYGBQ8WWM9 190 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 APOL6Q9BWW8 343 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 FCHO1O14526 889 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 DNALI1O14645 258 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 IDO1P14902 403 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 COPB2P35606 906 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 NUP93Q8N1F7 819 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 H7C1W4 665 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 KLHL41O60662 606 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 FCER1AP12319 257 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 MFAP3P55082 362 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 NLRP11P59045 1033 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 EYA4O95677 639 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 CCNB1P14635 433 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 HP1BP3Q5SSJ5 553 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 RIPOR1Q6ZS17 1223 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 ZNF572Q7Z3I7 529 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 GPATCH1Q9BRR8 931 aaKnown RBP13.54□□□□□ -0.24
VAMP4-201ENST00000236192 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 ZNF609O15014 1411 aa13.54□□□□□ -0.24
VAMP4-201ENST00000236192 GNGT2O14610 69 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 MRPL28Q13084 256 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 MAPK6Q16659 721 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 KHDC1Q4VXA5 237 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 EMC10Q5UCC4 262 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ZCCHC7Q8N3Z6 543 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 MID2Q9UJV3 735 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 HADHQ16836 314 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 PYDC1Q8WXC3 89 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 USP20Q9Y2K6 914 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 F8W8V4 182 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 AREL1O15033 823 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 FANCGO15287 622 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ITGA4P13612 1032 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 DEPTORQ8TB45 409 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 KRT82Q9NSB4 513 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms