RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ZHX2Q9Y6X8 837 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 COL4A5P29400 1685 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC16A4O15374 487 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 ACSL3O95573 720 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 FMO1Q01740 532 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 TRIP13Q15645 432 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 AOC3Q16853 763 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 LACTB2Q53H82 288 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SPDYCQ5MJ68 293 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 LLGL2Q6P1M3 1020 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 MYLK4Q86YV6 388 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 CENPTQ96BT3 561 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 FGD4Q96M96 766 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 GBP5Q96PP8 586 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 KIFC3Q9BVG8 833 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 KCNH7Q9NS40 1196 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 CTNNAL1Q9UBT7 734 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 UBE4BO95155 1302 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 RASGRF2O14827 1237 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ALAS1P13196 640 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MXI1P50539 228 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 DEUP1Q05D60 604 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 TSNAXIP1Q2TAA8 658 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 RFX8Q6ZV50 586 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MIGA2Q7L4E1 593 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 PIGWQ7Z7B1 504 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 EXOC3L1Q86VI1 746 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 COL23A1Q86Y22 540 aaPredicted RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MAGEC3Q8TD91 643 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ATG4AQ8WYN0 398 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ARHGEF2Q92974 986 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 HERPUD2Q9BSE4 406 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 PODXLO00592 558 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 CHKAP35790 457 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 PEX3P56589 373 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 TGFB2P61812 414 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 RASA3Q14644 834 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ARMC9Q7Z3E5 817 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 HAUS6Q7Z4H7 955 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 LDHDQ86WU2 507 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MFN1Q8IWA4 741 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 FAM71AQ8IYT1 594 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 XXYLT1Q8NBI6 393 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ART4Q93070 314 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZNF653Q96CK0 615 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 NUDCD1Q96RS6 583 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 LARSQ9P2J5 1176 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MTRF1LQ9UGC7 380 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 PFASO15067 1338 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MMP10P09238 476 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ETS2P15036 469 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ADSSP30520 456 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 RARRES1P49788 294 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 RCN2Q14257 317 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 SNRNP27Q8WVK2 155 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MASTLQ96GX5 879 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 TMEM237Q96Q45 408 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 FAM118BQ9BPY3 351 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 DDX50Q9BQ39 737 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 SYT15Q9BQS2 421 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MXRA8Q9BRK3 442 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 MRIQ9BWK5 157 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 RANBP17Q9H2T7 1088 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 VCXQ9H320 206 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 CDC42EP4Q9H3Q1 356 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 CHST7Q9NS84 486 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 CNOT7Q9UIV1 285 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 SCAF8Q9UPN6 1271 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 TMX2Q9Y320 296 aa10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZNFX1Q9P2E3 1918 aaKnown RBP10.01□□□□□ -0.81
HLA-DOA-201ENST00000229829 CFAP73A6NFT4 308 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 DHX15O43143 795 aaKnown RBP10□□□□□ -0.81
HLA-DOA-201ENST00000229829 CREB3O43889 395 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 RARGP13631 454 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 NCALDP61601 193 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 KLC1Q07866 573 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 CETN1Q12798 172 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 UGCGQ16739 394 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 ARL10Q8N8L6 244 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 DTX3LQ8TDB6 740 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 KCND2Q9NZV8 630 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 CCDC160A6NGH7 325 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 TTC36A6NLP5 189 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 NFIBO00712 420 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 AGTP01019 485 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 FESP07332 822 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 UBTFL6P0CB48 400 aaPredicted RBP10□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZCCHC18P0CG32 403 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 CYP11B1P15538 503 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 VPS41P49754 854 aa10□□□□□ -0.81
HLA-DOA-201ENST00000229829 SOX10P56693 466 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms