RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 NUB1Q9Y5A7 615 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 RTN2O75298 545 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 GNAT1P11488 350 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 GZMAP12544 262 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 ACO1P21399 889 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 HOXC8P31273 242 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TUBB4BP68371 445 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TFAMQ00059 246 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 PRKCZQ05513 592 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TAF3Q5VWG9 929 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 SMYD5Q6GMV2 418 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 PUF60Q9UHX1 559 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 NOP2P46087 812 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 CKAP4Q07065 602 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 SGSM1Q2NKQ1 1148 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 DCAF4L1Q3SXM0 396 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 PPP1R13LQ8WUF5 828 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 RFFLQ8WZ73 363 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 PCDHB18PQ96TA0 734 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 MMEP08473 750 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 TCP1P17987 556 aaKnown RBP15.97■□□□□ 0.15
CCDC47-201ENST00000225726 TRPC3Q13507 836 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 ZNF677Q86XU0 584 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CTAGE15A4D2H0 777 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 MYADML2A6NDP7 307 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 LACTBL1A8MY62 500 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CST3P01034 146 aaPredicted RBP15.97■□□□□ 0.15
CCDC47-201ENST00000225726 C6orf222P0C671 652 aaPredicted RBP15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CTAGE8P0CG41 777 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 NKX3-2P78367 333 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CTAGE6Q86UF2 777 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CTAGE4Q8IX94 777 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 TPCN2Q8NHX9 752 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
CCDC47-201ENST00000225726 TLR10Q9BXR5 811 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 ASB7Q9H672 318 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 CNTN6Q9UQ52 1028 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 PCDHB2Q9Y5E7 798 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 UMODL1Q5DID0 1318 aa15.97■□□□□ 0.15
CCDC47-201ENST00000225726 TREHO43280 583 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 DARSP14868 501 aaKnown RBP15.96■□□□□ 0.15
CCDC47-201ENST00000225726 MYL6P60660 151 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 SP3Q02447 781 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 TMEM62Q0P6H9 643 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 MEI1Q5TIA1 1274 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 C7orf31Q8N865 590 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 DNAJB3Q8WWF6 145 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 ACP6Q9NPH0 428 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 SEPT4O43236 478 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 CLSTN1O94985 981 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 TFRCP02786 760 aaKnown RBP15.96■□□□□ 0.15
CCDC47-201ENST00000225726 CATSPER4Q7RTX7 472 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 UBR7Q8N806 425 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 LRRC57Q8N9N7 239 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 CALR3Q96L12 384 aaKnown RBP15.96■□□□□ 0.15
CCDC47-201ENST00000225726 OSBPL9Q96SU4 736 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 CFHR5Q9BXR6 569 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 SPC25Q9HBM1 224 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 PCDHB4Q9Y5E5 795 aa15.96■□□□□ 0.15
CCDC47-201ENST00000225726 NCK2O43639 380 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 FTLP02792 175 aaPredicted RBP15.96■□□□□ 0.14
CCDC47-201ENST00000225726 FGFR4P22455 802 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 GRM5P41594 1212 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 TCEAL1Q15170 157 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 TEX35Q5T0J7 233 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 NME8Q8N427 588 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 TAF4BQ92750 862 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 OSMRQ99650 979 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 NIF3L1Q9GZT8 377 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 CDHR5Q9HBB8 845 aa15.96■□□□□ 0.14
CCDC47-201ENST00000225726 MEFVO15553 781 aaPredicted RBP15.95■□□□□ 0.14
CCDC47-201ENST00000225726 FTCDO95954 541 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 ABCB4P21439 1286 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 JADE1Q6IE81 842 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 RABGGTAQ92696 567 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 THAP2Q9H0W7 228 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 MROH7Q68CQ1 1323 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 RALGAPA2Q2PPJ7 1873 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 NFICP08651 508 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 RARBP10826 455 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF200P98182 395 aaPredicted RBP15.95■□□□□ 0.14
CCDC47-201ENST00000225726 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
CCDC47-201ENST00000225726 GNASQ5JWF2 1037 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SCARA3Q6AZY7 606 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 RHOT2Q8IXI1 618 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SYCE1Q8N0S2 351 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SLC35G2Q8TBE7 412 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 RPGRIP1Q96KN7 1286 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 ACAP3Q96P50 834 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 GINS2Q9Y248 185 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 AXLP30530 894 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 HOXA11P31270 313 aaPredicted RBP15.95■□□□□ 0.14
CCDC47-201ENST00000225726 ZNF699Q32M78 642 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SLC10A6Q3KNW5 377 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SLC27A1Q6PCB7 646 aa15.95■□□□□ 0.14
CCDC47-201ENST00000225726 SLFN11Q7Z7L1 901 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms