RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 FGFR3P22607 806 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 NUBP1P53384 320 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 YARSP54577 528 aaKnown RBP19.67■□□□□ 0.74
PFN1-201ENST00000225655 SLC12A3P55017 1021 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 UBE2HP62256 183 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 MCM6Q14566 821 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 UPP1Q16831 310 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 MPZL3Q6UWV2 235 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 ALYREFQ86V81 257 aaKnown RBP19.67■□□□□ 0.74
PFN1-201ENST00000225655 CEP120Q8N960 986 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 TARS2Q9BW92 718 aaKnown RBP19.67■□□□□ 0.74
PFN1-201ENST00000225655 TNMDQ9H2S6 317 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 PIDD1Q9HB75 910 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 BLOC1S4Q9NUP1 217 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 FBXW11Q9UKB1 542 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 CITO14578 2027 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 DOCK8Q8NF50 2099 aa19.67■□□□□ 0.74
PFN1-201ENST00000225655 SFI1A8K8P3 1242 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 ABLIM1O14639 778 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 TBCAO75347 108 aaKnown RBP19.66■□□□□ 0.74
PFN1-201ENST00000225655 PLS3P13797 630 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 GBP2P32456 591 aaPredicted RBP19.66■□□□□ 0.74
PFN1-201ENST00000225655 CLCNKBP51801 687 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 TCF15Q12870 199 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 SLC38A7Q9NVC3 462 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 EPS15L1Q9UBC2 864 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 HPSEQ9Y251 543 aa19.66■□□□□ 0.74
PFN1-201ENST00000225655 FAM237AA0A1B0GTK4 181 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 TRAPPC3O43617 180 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 PRPF40AO75400 957 aaKnown RBP19.65■□□□□ 0.74
PFN1-201ENST00000225655 HNRNPA1P09651 372 aaKnown RBP eCLIP19.65■□□□□ 0.74
PFN1-201ENST00000225655 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 MRE11P49959 708 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 NDUFA8P51970 172 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 SMTNP53814 917 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 OSTNP61366 133 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 RAD51AP2Q09MP3 1159 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 STRN3Q13033 797 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 CD300LGQ6UXG3 332 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 TMEM161BQ8NDZ6 487 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 DDX27Q96GQ7 796 aaKnown RBP19.65■□□□□ 0.74
PFN1-201ENST00000225655 SNX27Q96L92 541 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 TCHPQ9BT92 498 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.65■□□□□ 0.742e-18■■□□□ 11.4
PFN1-201ENST00000225655 HOOK1Q9UJC3 728 aaKnown RBP19.65■□□□□ 0.74
PFN1-201ENST00000225655 ODF2LQ9ULJ1 636 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 DUSP12Q9UNI6 340 aa19.65■□□□□ 0.74
PFN1-201ENST00000225655 A0A087X0B3 334 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 ADAM12O43184 909 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 MAPTP10636 758 aaKnown RBP19.64■□□□□ 0.73
PFN1-201ENST00000225655 KCNE1P15382 129 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 IGFBP6P24592 240 aaPredicted RBP19.64■□□□□ 0.73
PFN1-201ENST00000225655 HOXA9P31269 272 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 FAM160A1Q05DH4 1040 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 SOX4Q06945 474 aaPredicted RBP19.64■□□□□ 0.73
PFN1-201ENST00000225655 RAB33AQ14088 237 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 E2F4Q16254 413 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 LIN9Q5TKA1 542 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 MYADMQ96S97 322 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 GOLGA2P5Q9HBQ8 144 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 CNTN3Q9P232 1028 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 MTRRQ9UBK8 725 aa19.64■□□□□ 0.73
PFN1-201ENST00000225655 PDCD11Q14690 1871 aaKnown RBP19.63■□□□□ 0.73
PFN1-201ENST00000225655 TOM1L1O75674 476 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 FAM13AO94988 1023 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 ARSHQ5FYA8 562 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 ZPBP2Q6X784 338 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 ANKS3Q6ZW76 656 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 C3orf58Q8NDZ4 430 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 KCNN1Q92952 543 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 NXPE3Q969Y0 559 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 ZMAT2Q96NC0 199 aaKnown RBP19.63■□□□□ 0.73
PFN1-201ENST00000225655 IRF2BPLQ9H1B7 796 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 MFSD1Q9H3U5 465 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 LARSQ9P2J5 1176 aaKnown RBP19.63■□□□□ 0.73
PFN1-201ENST00000225655 BACE2Q9Y5Z0 518 aa19.63■□□□□ 0.73
PFN1-201ENST00000225655 H0YCG3 227 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 KINO60870 393 aaKnown RBP19.62■□□□□ 0.73
PFN1-201ENST00000225655 ZNF202O95125 648 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 MYL1P05976 194 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 C8AP07357 584 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 LAMP2P13473 410 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 OR1D2P34982 312 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 CLCN5P51795 746 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 NOLC1Q14978 699 aaKnown RBP eCLIP19.62■□□□□ 0.73
PFN1-201ENST00000225655 PPM1LQ5SGD2 360 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 ASTLQ6HA08 431 aaPredicted RBP19.62■□□□□ 0.73
PFN1-201ENST00000225655 RTL10Q7L3V2 364 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 TMEM105Q8N8V8 129 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 ZBTB45Q96K62 511 aaPredicted RBP19.62■□□□□ 0.73
PFN1-201ENST00000225655 GOLPH3LQ9H4A5 285 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 ZHX3Q9H4I2 956 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 KBTBD4Q9NVX7 518 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 ANKFY1Q9P2R3 1169 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 SERTAD1Q9UHV2 236 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 DOCK6Q96HP0 2047 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 CACNA1HO95180 2353 aa19.62■□□□□ 0.73
PFN1-201ENST00000225655 NPHP3-ACAD11A0A0J9YXS1 232 aa19.61■□□□□ 0.73
PFN1-201ENST00000225655 PODXLO00592 558 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms