RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TINF2Q9BSI4 451 aa31.79■■■□□ 2.68
PABPN1-201ENST00000216727 PCDHB4Q9Y5E5 795 aa31.79■■■□□ 2.68
PABPN1-201ENST00000216727 A0A0U1RQG5 324 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 B4GALT5O43286 388 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 HOXC6P09630 235 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 TRIM72Q6ZMU5 477 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 UBL4BQ8N7F7 174 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 TRIM11Q96F44 468 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 NAP1L3Q99457 506 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 MTMR12Q9C0I1 747 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 AVENQ9NQS1 362 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 ZSWIM8A7E2V4 1837 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 RAD51CO43502 376 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 B4GALT4O60513 344 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 CST3P01034 146 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 MYBL1P10243 752 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 TMEM270Q6UE05 265 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 KLHL7Q8IXQ5 586 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 UBR7Q8N806 425 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF668Q96K58 619 aaPredicted RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 RRAGCQ9HB90 399 aa31.78■■■□□ 2.68
PABPN1-201ENST00000216727 CNOT8Q9UFF9 292 aaKnown RBP31.78■■■□□ 2.68
PABPN1-201ENST00000216727 UMODL1Q5DID0 1318 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 SLC15A5A6NIM6 579 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF286BP0CG31 522 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 CENPCQ03188 943 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 MESDQ14696 234 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 ALG3Q92685 438 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 RNPC3Q96LT9 517 aaKnown RBP31.77■■■□□ 2.68
PABPN1-201ENST00000216727 ZSWIM1Q9BR11 485 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 AP1M1Q9BXS5 423 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 WNT8AQ9H1J5 351 aa31.77■■■□□ 2.68
PABPN1-201ENST00000216727 H3BRB1 525 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 CALCAP01258 141 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 FGGP02679 453 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 IQCF3P0C7M6 154 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 SMPD1P17405 629 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 COMTP21964 271 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 TMOD1P28289 359 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 ACVR2BQ13705 512 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 EEF1DP3Q658K8 133 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 MCOLN2Q8IZK6 566 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 CD101Q93033 1021 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 CDT1Q9H211 546 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 TUT1Q9H6E5 874 aaKnown RBP31.76■■■□□ 2.68
PABPN1-201ENST00000216727 EPB41L5Q9HCM4 733 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 CHORDC1Q9UHD1 332 aaPredicted RBP31.76■■■□□ 2.68
PABPN1-201ENST00000216727 HPCAL4Q9UM19 191 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 ZNF236Q9UL36 1845 aa31.76■■■□□ 2.68
PABPN1-201ENST00000216727 GUCY2DQ02846 1103 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 SGSM1Q2NKQ1 1148 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 IQSEC1Q6DN90 963 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 THNSL1Q8IYQ7 743 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 RBBP8NLQ8NC74 664 aaPredicted RBP31.76■■■□□ 2.67
PABPN1-201ENST00000216727 FAM212AQ96EL1 285 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 SLITRK6Q9H5Y7 841 aa31.76■■■□□ 2.67
PABPN1-201ENST00000216727 H3BQF6 201 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 SART1O43290 800 aaKnown RBP31.75■■■□□ 2.67
PABPN1-201ENST00000216727 GNA15P30679 374 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 AARSP49588 968 aaKnown RBP eCLIP31.75■■■□□ 2.678e-7■■□□□ 12.8
PABPN1-201ENST00000216727 ZNF132P52740 706 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 TMEM132AQ24JP5 1023 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 CAVIN3Q969G5 261 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 IL18RAPO95256 599 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 POU5F1Q01860 360 aaKnown RBP31.75■■■□□ 2.67
PABPN1-201ENST00000216727 AMHR2Q16671 573 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 PPP1R2P3Q6NXS1 205 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 MTHFD1LQ6UB35 978 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 EIF1ADQ8N9N8 165 aaKnown RBP31.75■■■□□ 2.67
PABPN1-201ENST00000216727 SLC5A4Q9NY91 659 aa31.75■■■□□ 2.67
PABPN1-201ENST00000216727 MMP3P08254 477 aa31.74■■■□□ 2.67
PABPN1-201ENST00000216727 NSFP46459 744 aaKnown RBP31.74■■■□□ 2.67
PABPN1-201ENST00000216727 PEX5P50542 639 aa31.74■■■□□ 2.67
PABPN1-201ENST00000216727 NNTQ13423 1086 aa31.74■■■□□ 2.67
PABPN1-201ENST00000216727 A0A087WZ62 844 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 MYL6P60660 151 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 PAK2Q13177 524 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 PPP2R5EQ16537 467 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 SCARA3Q6AZY7 606 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 NPLOC4Q8TAT6 608 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 FDXACB1Q9BRP7 624 aaPredicted RBP31.73■■■□□ 2.67
PABPN1-201ENST00000216727 NIF3L1Q9GZT8 377 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 MED4Q9NPJ6 270 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 AKT3Q9Y243 479 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 TMEM110-MUSTN1A8MSY1 372 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 TMEM191BP0C7N4 346 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 MCF2P10911 925 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 ITGA4P13612 1032 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 FAM193AP78312 1265 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 TRPC3Q13507 836 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 SND1Q7KZF4 910 aaKnown RBP eCLIP31.73■■■□□ 2.67
PABPN1-201ENST00000216727 EFCAB13Q8IY85 973 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP31.73■■■□□ 2.673e-6■■■□□ 17.7
PABPN1-201ENST00000216727 KRT35Q92764 455 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 CYFIP2Q96F07 1278 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 GDAP1L1Q96MZ0 367 aa31.73■■■□□ 2.67
PABPN1-201ENST00000216727 CCDC66A2RUB6 948 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 BHMG1C9JSJ3 638 aaPredicted RBP31.72■■■□□ 2.67
PABPN1-201ENST00000216727 TNNC2P02585 160 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms