RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 CYP1A2P05177 515 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 PGK2P07205 417 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GLI1P08151 1106 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MMEP08473 750 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 KRT5P13647 590 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 AP3M2P53677 418 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 NLRP11P59045 1033 aaKnown RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 CAPSQ13938 189 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 PTPROQ16827 1216 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 CELF3Q5SZQ8 465 aaKnown RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ALS2CLQ60I27 953 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ACAD10Q6JQN1 1059 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GOLGA6L1Q8N7Z2 621 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 WHAMMQ8TF30 809 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 TATDN2Q93075 761 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GPR20Q99678 358 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 TINF2Q9BSI4 451 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 C2orf40Q9H1Z8 148 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 PSD3Q9NYI0 1048 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 UVRAGQ9P2Y5 699 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GTF3C4Q9UKN8 822 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 COG5Q9UP83 839 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MSCO60682 206 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 CYBAP13498 195 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 TRIM32Q13049 653 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 BIRC3Q13489 604 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 CUL1Q13616 776 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MAATS1Q7Z4T9 603 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ZBTB8OSQ8IWT0 167 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 GLG1Q92896 1179 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ZNF653Q96CK0 615 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 TRIM11Q96F44 468 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 FGD4Q96M96 766 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 MRPL4Q9BYD3 311 aaKnown RBP13.74□□□□□ -0.21
RIPK3-201ENST00000216274 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 FAN1Q9Y2M0 1017 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
RIPK3-201ENST00000216274 HSF2BPO75031 334 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 ACOT2P49753 483 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 SLC26A2P50443 739 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 CRELD2Q6UXH1 353 aaPredicted RBP13.73□□□□□ -0.21
RIPK3-201ENST00000216274 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 DHX37Q8IY37 1157 aaKnown RBP13.73□□□□□ -0.21
RIPK3-201ENST00000216274 CASKIN2Q8WXE0 1202 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 IFT81Q8WYA0 676 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 DDX1Q92499 740 aaKnown RBP13.73□□□□□ -0.21
RIPK3-201ENST00000216274 GDAP1L1Q96MZ0 367 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 WNT8AQ9H1J5 351 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.73□□□□□ -0.21
RIPK3-201ENST00000216274 ANKFY1Q9P2R3 1169 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 FRMPD3Q5JV73 1810 aa13.73□□□□□ -0.21
RIPK3-201ENST00000216274 ASB14A6NK59 587 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 OPA1O60313 960 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 ARIH2O95376 493 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 CYP2C19P33261 490 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 CARSP49589 748 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 PPP1R2P3Q6NXS1 205 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 MREGQ8N565 214 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 ZNF564Q8TBZ8 553 aaPredicted RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 PRPF31Q8WWY3 499 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 RNPC3Q96LT9 517 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 HINFPQ9BQA5 517 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 NUP85Q9BW27 656 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 ADAM21Q9UKJ8 722 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 NFU1Q9UMS0 254 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 MCM3APO60318 1980 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SART1O43290 800 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 RNF40O75150 1001 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SYF2O95926 243 aaKnown RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 FGGP02679 453 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 MYBL1P10243 752 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 TFDP1Q14186 410 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SURF1Q15526 300 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SPATA33Q96N06 139 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 ZSWIM1Q9BR11 485 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 SMARCAD1Q9H4L7 1026 aa13.72□□□□□ -0.21
RIPK3-201ENST00000216274 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.21
RIPK3-201ENST00000216274 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms