RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MCM2P49736 904 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 MCL1Q07820 350 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 TMEM119Q4V9L6 283 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 MTSS1LQ765P7 747 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 GPR152Q8TDT2 470 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 TCHPQ9BT92 498 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 RPP25Q9BUL9 199 aaKnown RBP17.37■□□□□ 0.37
ERCC1-201ENST00000013807 PLEKHA5Q9HAU0 1116 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 DLGAP2Q9P1A6 1054 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 DNMT3BQ9UBC3 853 aaKnown RBP17.37■□□□□ 0.37
ERCC1-201ENST00000013807 MAFFQ9ULX9 164 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-201ENST00000013807 F5P12259 2224 aa17.37■□□□□ 0.37
ERCC1-201ENST00000013807 H0YCG3 227 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 PODXLO00592 558 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 CCL16O15467 120 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
ERCC1-201ENST00000013807 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ATF2P15336 505 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 GJB2P29033 226 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 STARD6P59095 220 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 OSTNP61366 133 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 NTHL1P78549 312 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 STRN3Q13033 797 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ARSHQ5FYA8 562 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 VARS2Q5ST30 1063 aaKnown RBP17.36■□□□□ 0.37
ERCC1-201ENST00000013807 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 PARM1Q6UWI2 310 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 TCEAL8Q8IYN2 117 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ITFG1Q8TB96 612 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ZBTB45Q96K62 511 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-201ENST00000013807 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ARHGEF3Q9NR81 526 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 LARSQ9P2J5 1176 aaKnown RBP17.36■□□□□ 0.37
ERCC1-201ENST00000013807 ODF2LQ9ULJ1 636 aa17.36■□□□□ 0.37
ERCC1-201ENST00000013807 WDR27A2RRH5 827 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 PRR23AA6NEV1 266 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 MICAL2O94851 1124 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 ADRB2P07550 413 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 ROR1Q01973 937 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
ERCC1-201ENST00000013807 ANGPT1Q15389 498 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 ZBTB6Q15916 424 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 PABPC1LQ4VXU2 614 aaKnown RBP17.35■□□□□ 0.37
ERCC1-201ENST00000013807 TPGS2Q68CL5 300 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 ASCL5Q7RTU5 278 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 TSPAN18Q96SJ8 248 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 DDX23Q9BUQ8 820 aaKnown RBP17.35■□□□□ 0.37
ERCC1-201ENST00000013807 TBC1D17Q9HA65 648 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 GDE1Q9NZC3 331 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 PATJQ8NI35 1801 aa17.35■□□□□ 0.37
ERCC1-201ENST00000013807 TTC26A0AVF1 554 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 H7C4K7 107 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 I3L4J1 428 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 CLDN3O15551 220 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 CENPBP07199 599 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-201ENST00000013807 CYP3A5P20815 502 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 ZNF131P52739 623 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 GPC5P78333 572 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 OTOGLQ3ZCN5 2332 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 NPAS3Q8IXF0 933 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-201ENST00000013807 SHDQ96IW2 340 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 HAPLN2Q9GZV7 340 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 SEMA4AQ9H3S1 761 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 HCFC1R1Q9NWW0 138 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 CA14Q9ULX7 337 aa17.34■□□□□ 0.37
ERCC1-201ENST00000013807 H3BQV1 296 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 FAM189A1O60320 539 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 BMP15O95972 392 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 PIGRP01833 764 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 CLTAP09496 248 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 PTPN2P17706 415 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 LRPAP1P30533 357 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 KYAT1Q16773 422 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 NKD2Q969F2 451 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-201ENST00000013807 OXCT2Q9BYC2 517 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-201ENST00000013807 OSBPL6Q9BZF3 934 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 FBXL5Q9UKA1 691 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 POLIQ9UNA4 740 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 SIT1Q9Y3P8 196 aa17.33■□□□□ 0.36
ERCC1-201ENST00000013807 SCN1AP35498 2009 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 M0QZQ0 153 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 ECI2O75521 394 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 OAZ2O95190 189 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 RHOP08100 348 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERCC1-201ENST00000013807 PRKCQQ04759 706 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 ZRSR1Q15695 479 aaKnown RBP17.32■□□□□ 0.36
ERCC1-201ENST00000013807 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 APPL2Q8NEU8 664 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 PJA1Q8NG27 643 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 DDX12PQ92771 950 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 CDK5RAP3Q96JB5 506 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms