RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Tdp1Q8BJ37 609 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rccd1Q8BTU7 377 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mill1Q8HWE7 395 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dph6Q9CQ28 267 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gtf2h1Q9DBA9 547 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rnf6Q9DBU5 667 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Extl3Q9WVL6 918 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Sbno2Q7TNB8 1349 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gm5936A2BG95 728 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gm5640A3KG49 728 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Q3UTZ3 580 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 SpdyaQ5IBH7 310 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cdc14aQ6GQT0 603 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Uts2bQ765I1 113 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Tbc1d22bQ80VE5 505 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cdkn2aipQ8BI72 563 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rassf9Q8K342 435 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dnajc18Q9CZJ9 357 aa19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Zdbf2Q5SS00 2493 aaKnown RBP19.48■□□□□ 0.71
Trim47-202ENSMUST00000106441 Krt28A6BLY7 462 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pgk2P09041 417 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Hoxc6P10629 235 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Frg1P97376 258 aaKnown RBP19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gspt2Q149F3 632 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pbxip1Q3TVI8 727 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Calhm6Q8C9E8 313 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mcur1Q9CXD6 340 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gtf3c6Q9D8P7 227 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ccdc182Q9D9C6 152 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cpb2Q9JHH6 422 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Znf354bQ9QXT9 601 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ripk3Q9QZL0 486 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 RptorQ8K4Q0 1335 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dhtkd1A2ATU0 921 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Unc13dB2RUP2 1085 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dhx15O35286 795 aaKnown RBP19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Casp14O89094 257 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 StamP70297 548 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 IgflQ6B9Z0 140 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 SpopQ6ZWS8 374 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Slc7a6osQ7TPE5 306 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Trim65Q8BFW4 522 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rint1Q8BZ36 792 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Wdr60Q8C761 999 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 PdgfcQ8CI19 345 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Q922C1 641 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Atp6v1e2Q9D593 226 aa19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Orc3Q9JK30 715 aaKnown RBP19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Smchd1Q6P5D8 2007 aaKnown RBP19.47■□□□□ 0.71
Trim47-202ENSMUST00000106441 Atp2c2A7L9Z8 944 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 TazI7HJS2 263 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 RcvrnP34057 202 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cdc25cP48967 447 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 rp9P97762 213 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 ZufspQ3T9Z9 577 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cln3Q61124 438 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ano5Q75UR0 904 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pls3Q99K51 630 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Hspbp1Q99P31 357 aaKnown RBP19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Snx29Q9D3S3 818 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Satl1Q9D5N8 744 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Znf704Q9ERQ3 566 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pdzrn4E9PUZ9 1014 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ebf2O08792 575 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rab21P35282 222 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 PrkczQ02956 592 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Agbl1Q09M05 972 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Lrrc14bQ3UJB3 510 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Six1Q62231 284 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Styk1Q6J9G1 429 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mageb18Q8BQR7 327 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 ItpkaQ8R071 459 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Med15Q924H2 789 aa19.46■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mmrn2A6H6E2 943 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Myo1eE9Q634 1107 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Kcnk16G5E845 292 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gm5814J3QP80 125 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Xrcc5P27641 732 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Smarcad1Q04692 1021 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Lmntd2Q0VET5 664 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Srrm1Q52KI8 946 aaKnown RBP19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 FancbQ5XJY6 703 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Tmem117Q8BH18 514 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Cwf19l1Q8CI33 537 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rell1Q8K2J7 272 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Nmrk1Q91W63 195 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Fgd4Q91ZT5 766 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mrfap1Q9CQL7 125 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Adgrf4Q9D2L6 698 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Smok2bQ9QYZ3 484 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Smok2aQ9QYZ6 504 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Adam22Q9R1V6 904 aa19.45■□□□□ 0.7
Trim47-202ENSMUST00000106441 Slfn8B1ARD8 910 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Rap1gds1E9Q912 607 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Sash1P59808 1230 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Gtf2bP62915 316 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Mansc4Q3UU94 337 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Krt12Q64291 487 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Plk4Q64702 925 aa19.44■□□□□ 0.7
Trim47-202ENSMUST00000106441 Daam2Q80U19 1115 aa19.44■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms