RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ccdc144bE9PVZ3 520 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Olfr1354E9Q5G9 310 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Gprin1Q3UNH4 932 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Ppp4r3cQ3V0Y1 813 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Map3k10Q66L42 940 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Polr2eQ80UW8 210 aaKnown RBP16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Dhx32Q8BZS9 744 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 FtcdQ91XD4 541 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Pla2g12bQ99P27 195 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Ccdc97Q9DBT3 340 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Cyp39a1Q9JKJ9 470 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Tlr8P58682 1032 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Mark3Q03141 753 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Gm1604bQ3TRG0 118 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Fam198bQ3UPI1 517 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Pacsin1Q61644 441 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 C1qtnf1Q9QXP7 281 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Tmem132bF7BAB2 1078 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Nkx1-1G3UXB3 402 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Lpar1P61793 364 aa16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Rpn1Q91YQ5 608 aaKnown RBP16.59■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Gm3248K7N721 186 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Col6a1Q04857 1025 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 RubcnQ80U62 956 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Trim65Q8BFW4 522 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 3830417A13RikQ8BQJ2 303 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Gpc5Q8CAL5 572 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Tada2aQ8CHV6 443 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Pcdha9Q91Y11 979 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Cdk9Q99J95 372 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Ndufaf7Q9CWG8 436 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Mrpl4Q9DCU6 294 aaKnown RBP16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Trpc4Q9QUQ5 974 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Tjp3Q9QXY1 905 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Trpv2Q9WTR1 756 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Qser1A2BIE1 1698 aa16.58■□□□□ 0.25
Clcn3-203ENSMUST00000093490 Klc1O88447 541 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 SelpQ01102 768 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Hsdl2Q2TPA8 490 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Raver2Q7TPD6 673 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Lrfn2Q80TG9 788 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Zfp418Q8BFS8 652 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Cnbd2Q9D5U8 673 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Add1Q9QYC0 735 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gm5160F8VPN3 147 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 PbsnO08976 174 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Fmr1P35922 614 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Pid1Q3UBG2 217 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rc3h1Q4VGL6 1130 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Nr2c1Q505F1 590 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 ItgaeQ60677 1167 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Fam102aQ78T81 392 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trmt2aQ8BNV1 574 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trip10Q8CJ53 603 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Snx2Q9CWK8 519 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gm3402K7N5P2 326 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gnat1P20612 350 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Pde6bP23440 856 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Irx2P81066 474 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tex11Q14AT2 947 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tatdn3Q3U1C6 294 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Skap2Q3UND0 358 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tmprss11aQ3UQ41 389 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Cyfip2Q5SQX6 1253 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Alkbh8Q80Y20 664 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Alg1Q921Q3 482 aa16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Abt1Q9QYL7 269 aaKnown RBP16.58■□□□□ 0.24
Clcn3-203ENSMUST00000093490 JcadQ5DTX6 1320 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 AV320801A2AWL3 467 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gm15023L7MUB4 467 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Mucl2P02815 138 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 UrosP51163 265 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Trim43cP86449 446 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Gm11437Q5QR91 290 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Krt75Q8BGZ7 551 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Dcun1d2Q8BZJ7 259 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Washc5Q8C2E7 1159 aaKnown RBP16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Zmat2Q9CPW7 199 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Zswim7Q9CWQ2 152 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Nme9A0A1L1SUL6 329 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 4930523C07RikE9Q2T4 99 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Nmt1O70310 496 aaKnown RBP16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Pou6f1Q07916 301 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Slfnl1Q8BHW9 410 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Drd5Q8BLD9 478 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Agap1Q8BXK8 857 aaKnown RBP16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 CenpuQ8C4M7 410 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Vmn1r214Q8R279 367 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Ccdc151Q8BSN3 593 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tph2Q8CGV2 488 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 PdxkQ8K183 312 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Anxa13Q99JG3 317 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Odc1P00860 461 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Slc2a13Q3UHK1 637 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Tmem232Q5K6N0 675 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 TbataQ7TSD4 393 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rpa1Q8VEE4 623 aaKnown RBP16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Rps6kb2Q9Z1M4 485 aa16.57■□□□□ 0.24
Clcn3-203ENSMUST00000093490 Atxn10P28658 475 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms