RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Q8CCC3 530 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gpc3Q8CFZ4 579 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 B3galt6Q91Z92 325 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm3404Q9D506 307 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Unc13dB2RUP2 1085 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fzd1O70421 642 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Krt13P08730 437 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pla2g4aP47713 748 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Shmt1P50431 478 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 B3gat3P58158 335 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Senp1P59110 640 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ptpn18Q61152 453 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fhod1Q6P9Q4 1197 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Kcnt1Q6ZPR4 1224 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dclk3Q8BWQ5 790 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Lmo3Q8BZL8 145 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ccz1Q8C1Y8 480 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Card14Q99KF0 999 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Igkv10-96A0A140T8M1 115 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm8369E9PZI3 166 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lamp2P17047 415 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gnl1P36916 607 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gad1P48318 593 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Vamp7P70280 220 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tmem232Q5K6N0 675 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Arl5cQ6P068 179 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Znf12Q7TSI0 686 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tor4aQ8BH02 426 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Usp38Q8BW70 1042 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Micu3Q9CTY5 523 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 TheglQ9DA15 459 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Homer2Q9QWW1 354 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Adam22Q9R1V6 904 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Vmn2r17E9PYF5 849 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm3383J3QQ59 259 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rgs2O08849 211 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pbx3O35317 434 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mmp15O54732 657 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Polr2fP61219 127 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dlg3P70175 849 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Muc3aQ3U5A2 218 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Vps51Q3UVL4 782 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lrrc66Q8K0B3 872 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gga1Q8R0H9 635 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fam133bQ9CVI2 245 aaKnown RBP10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Abcb6Q9DC29 842 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nr1h3Q9Z0Y9 445 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Myo7aP97479 2215 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Plxnb3Q9QY40 1902 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Olfr391-psA0A0U1RNJ4 312 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nr1i3O35627 358 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cd72P21855 354 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Nucb2P81117 420 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 HmmrQ00547 794 aaKnown RBP10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 GnsQ8BFR4 544 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Slc2a12Q8BFW9 622 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rftn2Q8CHX7 500 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ap3m2Q8R2R9 418 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 B4galt3Q91YY2 395 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tom1l1Q923U0 474 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Spred2Q924S7 410 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Phf14Q9D4H9 881 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ttc9bQ9D6E4 239 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tpcn1Q9EQJ0 817 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dnajc7Q9QYI3 494 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Slfn14V9GXG1 899 aa10.64□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ttc13A0A1L1SSC7 844 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Veph1A1A535 833 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cnbd1B1AWM0 430 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm10110D3Z5M2 615 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gpr15Q0VDU3 360 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tas2r125Q7M710 311 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Bola2Q8BGS2 86 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tbc1d22aQ8R5A6 516 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Eml3Q8VC03 897 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Scrn2Q8VCA8 425 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 CarfQ8VHI4 689 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MlklQ9D2Y4 472 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Sclt1G5E861 688 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ccdc191J3QQ27 883 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Aldh1a1P24549 501 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ptcd3Q14C51 685 aaKnown RBP10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ndst1Q3UHN9 882 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Olfr1046Q7TR79 316 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cct8l1Q80YT3 562 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Neto2Q8BNJ6 525 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pcdha9Q91Y11 979 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 DarsQ922B2 501 aaKnown RBP10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Chst12Q99LL3 419 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Them5Q9CQJ0 248 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mrpl2Q9D773 306 aaKnown RBP10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Spock2Q9ER58 423 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cyp4a29A0A087WPC3 509 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 1700031M16RikA0A087WSH0 82 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tbxas1P36423 533 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lrch2Q3UMG5 773 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Arhgap10Q6Y5D8 786 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tmem202Q80W35 275 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Reps2Q80XA6 521 aa10.63□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Llgl1Q80Y17 1036 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms