RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ndufa8Q9DCJ5 172 aa13.17□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 GabrqQ9JLF1 638 aa13.17□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Padi3Q9Z184 664 aa13.17□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 MgamB5THE2 1827 aa13.17□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Slc4a11A2AJN7 862 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 ZxdbA2CE44 873 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Rasa1E9PYG6 1038 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Tcp10bE9PYJ0 438 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Tcp10cE9Q046 482 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Zfp457L7N1X4 647 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Olfr743L7N1Y2 311 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Syn1O88935 706 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Wnt6P22727 364 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Tmprss9P69525 1065 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Zfp658Q5PPQ4 887 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 CochQ62507 552 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Arhgap30Q640N3 1101 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 RetsatQ64FW2 609 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Pwwp2aQ69Z61 730 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Mvb12bQ6KAU4 317 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Arl5cQ6P068 179 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Rad9bQ6WBX7 403 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Gpr61Q8C010 449 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Taf2Q8C176 1104 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Eps8l1Q8R5F8 716 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Atoh8Q99NA2 322 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Zfp236S4R299 1847 aa13.16□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 KcpQ3U492 1550 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Lilra6A0A0B4J1F3 663 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 9330159F19RikD3Z623 648 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 4930444G20RikD3Z741 495 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Slc12a1P55014 1095 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Mfsd14aP70187 490 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Hoxd13P70217 339 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Grm6Q5NCH9 871 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Rrp12Q6P5B0 1295 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Arhgap26Q6ZQ82 814 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Olfr412Q7TRW7 312 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Trnau1apQ80VC6 287 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 RimklbQ80WS1 387 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Olfr345Q8VGK4 311 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 CarfQ8VHI4 689 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Pcdhb19Q91Y01 801 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Q922C1 641 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Brms1Q99N20 246 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Hspbp1Q99P31 357 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Fam133bQ9CVI2 245 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Mss51Q9D5Z5 446 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 MajinQ9D992 256 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 CenpkQ9ESN5 271 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Gtf2ird1Q9JI57 1104 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Dnajc12Q9R022 198 aa13.15□□□□□ -0.3
Ccdc28a-202ENSMUST00000080860 Ptpn3A2ALK8 913 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ttll10A4Q9F3 704 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ccl4P14097 92 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Hk1P17710 974 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Brcc3P46737 291 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pstpip1P97814 415 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Nhlh1Q02576 133 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ndst1Q3UHN9 882 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cep135Q6P5D4 1140 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Q8BGN9 141 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gpatch3Q8BIY1 525 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ccdc38Q8CDN8 563 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Chst12Q99LL3 419 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Them5Q9CQJ0 248 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 MymkQ9D1N4 221 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ephx1Q9D379 455 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zfyve19Q9DAZ9 389 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gdap2Q9DBL2 498 aa13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Add1Q9QYC0 735 aaKnown RBP13.14□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cyp2b13A6H6J2 491 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm13212B1ASQ7 799 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Fam170bE9PXT9 378 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Zscan29E9Q5B4 869 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Prr22F6TNE3 422 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rab11fip2G3XA57 512 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Vmn2r19G5E8G4 854 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Stk10O55098 966 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rin3P59729 980 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Acot10Q32MW3 439 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tmc5Q32NZ6 967 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gas2l3Q3UWW6 683 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tbc1d1Q60949 1255 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Plekhs1Q8BW88 474 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ccdc169Q8BXX9 214 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Hgh1Q8C3I8 393 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gpr158Q8C419 1200 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pde5aQ8CG03 865 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Lrrc41Q8K1C9 807 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Timd2Q8R183 305 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 SarafQ8R3Q0 334 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Ackr4Q924I3 350 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Psmd6Q99JI4 389 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cyp4f13Q99N19 523 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Rhobtb3Q9CTN4 611 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Tacc2Q9JJG0 1149 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Cd97Q9Z0M6 818 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Pex11aQ9Z211 246 aa13.13□□□□□ -0.31
Ccdc28a-202ENSMUST00000080860 Gm45208A0A140LJ36 292 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms