RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Chrm1P12657 460 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cd44P15379 778 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Hoxb13P70321 286 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ppm1jQ149T7 507 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Trim72Q1XH17 477 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rmdn3Q3UJU9 470 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Snx19Q6P4T1 997 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ints2Q80UK8 1198 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gprc5aQ8BHL4 356 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Neto2Q8BNJ6 525 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ago3Q8CJF9 860 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam133bQ9CVI2 245 aaKnown RBP9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mageb3Q9D2H4 330 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tcirg1Q9JHF5 834 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Egfl7Q9QXT5 275 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Plekhg4A0A1L1SU27 1217 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tbkbp1A2A9T0 611 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3252E9PUT9 216 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3468E9QAJ8 216 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Aoc3O70423 765 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rrm1P07742 792 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 MsnP26041 577 aaKnown RBP9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Shmt1P50431 478 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sparcl1P70663 650 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cep112Q5PR68 954 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Armcx2Q6A058 784 aaKnown RBP9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Znf12Q7TSI0 686 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sass6Q80UK7 654 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Wscd1Q80XH4 572 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Psmd5Q8BJY1 504 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Iqcb1Q8BP00 598 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Unc5bQ8K1S3 945 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pdk2Q9JK42 407 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rfx5Q9JL61 658 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dnajc12Q9R022 198 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Wdr46Q9Z0H1 622 aaKnown RBP9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lama3Q61789 3330 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Btnl4A2CG29 586 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zfp266E9Q2S7 604 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Spata31d1dE9Q5W2 1247 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Krt13P08730 437 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Serpinh1P19324 417 aaKnown RBP9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 HmmrQ00547 794 aaKnown RBP9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pou6f1Q07916 301 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Trip13Q3UA06 432 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Spata20Q80YT5 790 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Aldh5a1Q8BWF0 523 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 NcaphQ8C156 731 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttc16Q8C1F5 767 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sash3Q8K352 380 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Adgrg3Q8R0T6 542 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Alas1Q8VC19 642 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ankrd54Q91WK7 299 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pcdha9Q91Y11 979 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 EpgnQ924X1 152 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dph5Q9CWQ0 281 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Stk4Q9JI11 487 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Irx4Q9QY61 515 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gadd45gQ9Z111 159 aa9.31□□□□□ -0.92
Trim39-201ENSMUST00000042717 Abcb5B5X0E4 1255 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3415J3QMS8 315 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Casp14O89094 257 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sox8Q04886 464 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 ItpripQ3TNL8 555 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kctd19Q562E2 927 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cyfip2Q5SQX6 1253 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tmem220Q8BP07 167 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 ClmnQ8C5W0 1052 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Inpp5fQ8CDA1 1132 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zswim3Q8CFL8 695 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 IntS13Q8QZV7 732 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ap3m2Q8R2R9 418 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttc1Q91Z38 292 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Grpel1Q99LP6 217 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lztr1Q9CQ33 837 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3404Q9D506 307 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 SktA2AQ25 1946 aaKnown RBP9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Btbd18A0A0A6YY25 723 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm45140A0A0N4SUM8 220 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ptpn3A2ALK8 913 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm4297D3YWB7 211 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Itgb3O54890 787 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tnnc1P19123 161 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rad54lP70270 747 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam92bQ3V2J0 292 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zbtb17Q60821 794 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Sema5aQ62217 1077 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Irak1Q62406 710 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Chn1Q91V57 459 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Themis2Q91YX0 663 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Asb7Q91ZU0 318 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mms19Q9D071 1031 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 MlklQ9D2Y4 472 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Spata17Q9D552 379 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rab11fip1Q9D620 645 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tubb4aQ9D6F9 444 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Xrn2Q9DBR1 951 aaKnown RBP9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dpy19l4A2AJQ3 722 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 EgfP01132 1217 aa9.3□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tulp2P46686 562 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms