RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 UncxO08934 530 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cdk4P30285 303 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ctnnd1P30999 938 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Afap1l2Q5DTU0 825 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 CybbQ61093 570 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 NntQ61941 1086 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ric8bQ80XE1 520 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Hpcal4Q8BGZ1 191 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Igdcc3Q8BQC3 813 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 OafQ8QZR4 282 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Psip1Q99JF8 528 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cttnbp2nlQ99LJ0 638 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Q9D9D9 101 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gtf2ird1Q9JI57 1104 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Uchl3Q9JKB1 230 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccdc144bE9PVZ3 520 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gcnt4E9Q649 455 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Serpinb6eI7HJI3 429 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Alox15P39654 663 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Stmn1P54227 149 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Serpina1eQ00898 413 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Wdr44Q6NVE8 915 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Asnsd1Q8BFS9 627 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Sun2Q8BJS4 731 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Elmo3Q8BYZ7 720 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Osbpl1aQ91XL9 950 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Slc16a6B1AT66 607 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kdelc2G5E897 503 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Glud1P26443 558 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cnga4Q3UW12 575 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rnpc3Q3UZ01 514 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ice2Q3UZ18 988 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tmc3Q7TQ69 1130 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tmtc4Q8BG19 741 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 E2f4Q8R0K9 410 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Snx9Q91VH2 595 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mss51Q9D5Z5 446 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Peg12Q9WVA7 283 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cntnap5cQ0V8T7 1305 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Wdr72D3YYM4 1114 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gm3460E9QAI8 215 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Farp1F8VPU2 1048 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 CfhP06909 1234 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pde6bP23440 856 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Syt2P46097 422 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Fam81aQ3UXZ6 364 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nlrp4eQ66X19 978 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Prr18Q6PAN7 307 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 AagabQ8R2R3 316 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mov10l1Q99MV5 1187 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Micu3Q9CTY5 523 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Snx29Q9D3S3 818 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ankrd2Q9WV06 328 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rap1gapA2ALS5 663 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Akap5D3YVF0 745 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Anxa5P48036 319 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cdc25cP48967 447 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nol4P60954 483 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Atp8b1Q148W0 1251 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ppp1r7Q3UM45 361 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Zfp957Q3UT76 567 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Btg1-ps1Q3V0S2 161 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Btg1-ps2Q3V0X0 161 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nlrp14Q6B966 993 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Stk38lQ7TSE6 464 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dnph1Q80VJ3 173 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pnpt1Q8K1R3 783 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Plekha4Q8VC98 588 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dnajc28Q8VCE1 385 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rassf7Q9DD19 359 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Arrdc4A0A0B4J1F4 415 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Sh3bp1P55194 680 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Eif3eP60229 445 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mrps31Q61733 384 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Lrig3Q6P1C6 1117 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tdpoz4Q6YCH2 370 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Vcpip1Q8CDG3 1220 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Krt5Q922U2 580 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Stx12Q9ER00 274 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Osbpl9A2A8Z1 736 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pid1Q3UBG2 217 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Lrrn2Q6PHP6 730 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Btnl9Q8BJE2 536 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 VcpkmtQ8C436 228 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 OtoaQ8K561 1137 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Taf6lQ8R2K4 616 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mrps22Q9CXW2 359 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 EtfbQ9DCW4 255 aaKnown RBP12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tspan3Q9QY33 253 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cog1Q9Z160 980 aa12.54□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ctnnal1O88327 731 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 HelqQ2VPA6 1069 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Elac2Q80Y81 831 aaKnown RBP12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pi4kbQ8BKC8 816 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccdc159Q8C963 411 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 NelfcdQ922L6 591 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Anxa9Q9JHQ0 345 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Sept5Q9Z2Q6 369 aa12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mov10P23249 1004 aaKnown RBP12.53□□□□□ -0.4
Pcif1-201ENSMUST00000041643 OtulinQ3UCV8 352 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms