RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Trim9Q8C7M3 817 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Alx1Q8C8B0 326 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gpc3Q8CFZ4 579 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Dcaf8Q8N7N5 591 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Eya4Q9Z191 616 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ssc5dQ8BV57 1371 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm17615E9Q9P2 165 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Prl2c2P04095 224 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Dab2ipQ3UHC7 1189 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Vcpip1Q8CDG3 1220 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Adprhl2Q8CG72 370 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Chn1Q91V57 459 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Snx2Q9CWK8 519 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Sgf29Q9DA08 293 aaKnown RBP9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 DmgdhQ9DBT9 869 aa9.25□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Hecw1Q8K4P8 1604 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ccdc194A0A140LIT1 234 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 1700011I03RikE9PYL8 271 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 RnpepQ8VCT3 650 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 TarsQ9D0R2 722 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Dthd1E9PZX1 795 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 DtnbO70585 659 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ubtfl1Q3USZ2 394 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Slc17a8Q8BFU8 601 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gpr150Q8BL07 427 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tada2aQ8CHV6 443 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 OtoaQ8K561 1137 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Trim54Q9ERP3 366 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Pdzrn4E9PUZ9 1014 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Crnkl1P63154 690 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Skap1Q3UUV5 355 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ece1Q4PZA2 769 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 PigoQ9JJI6 1093 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tjp3Q9QXY1 905 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Extl3Q9WVL6 918 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Bnip3O55003 187 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Hddc2Q3SXD3 199 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Pbxip1Q3TVI8 727 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Foxn1Q61575 648 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Taf11Q99JX1 211 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Fthl17aQ9DAX0 182 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Zmym2Q9CU65 1376 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Prom1O54990 867 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Hsdl2Q2TPA8 490 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 SpdyaQ5IBH7 310 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Epha7Q61772 998 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tdpoz3Q717B4 365 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Trmt2aQ8BNV1 574 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Q8BWG4 1187 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Lztr1Q9CQ33 837 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 PmpcbQ9CXT8 489 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Sun1Q9D666 913 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Asah2Q9JHE3 756 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Orc3Q9JK30 715 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm28036V9GXJ1 658 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ighv11-1A0A075B5R6 117 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm2237E9Q501 211 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm3591K7N6X2 186 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm10436L7N1Y3 520 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Celf6Q7TN33 460 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Irx5Q9JKQ4 484 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Fbxo16Q9QZM9 334 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ccng2O08918 344 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Actr2P61161 394 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Olfr8Q60892 310 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Hif1aQ61221 836 aaKnown RBP9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 SybuQ8BHS8 665 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tspan17Q9D7W4 270 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Akap12Q9WTQ5 1684 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tbkbp1A2A9T0 611 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Wdr41Q3UDP0 460 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Pacsin1Q61644 441 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Spon2Q8BMS2 330 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Alpk1Q9CXB8 1231 aa9.24□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Arhgap4B1AUY3 965 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Vsnl1P62761 191 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Atp8b1Q148W0 1251 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Odr4Q4PJX1 447 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Tbc1d22bQ80VE5 505 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Pum3Q8BKS9 647 aaKnown RBP9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 SgczQ8BX51 311 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Wars2Q9CYK1 360 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Morf4l2Q9R0Q4 288 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Bub1bQ9Z1S0 1052 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Akr1b10G5E895 316 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Prmt9Q3U3W5 846 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ankrd34bQ3UUF8 508 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 EregQ61521 162 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Zswim7Q9CWQ2 152 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Myh2G3UW82 1942 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Myh1Q5SX40 1942 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Cyp2d34L7N463 504 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Wee1P47810 646 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Eps15l1Q60902 907 aaKnown RBP9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Ano5Q75UR0 904 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Lrrc27Q80YS5 523 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Rassf9Q8K342 435 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm4307E9PZY4 289 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Gm4312K9J7E2 289 aa9.23□□□□□ -0.93
Ttc28-201ENSMUST00000040111 Trpc1Q61056 793 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms