RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 EregQ61521 162 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gpt2Q8BGT5 522 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfml3Q8BK62 406 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Agap1Q8BXK8 857 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfr397Q8VEZ6 315 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ube2sQ921J4 223 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Bcs1lQ9CZP5 418 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pidd1Q9ERV7 915 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Shcbp1Q9Z179 668 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arap3Q8R5G7 1538 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm3095E9Q058 166 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tlk2O55047 718 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 ProcP33587 460 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Scg3P47867 471 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pcsk1P63239 753 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 1810065E05RikQ5NC41 235 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sec23ipQ6NZC7 998 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Dnph1Q80VJ3 173 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccdc50Q810U5 305 aaKnown RBP10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmem120aQ8C1E7 343 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sept10Q8C650 452 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 MypopQ8R4U1 393 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gtf2h1Q9DBA9 547 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pold3Q9EQ28 462 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 GsnP13020 780 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rbp3P49194 1234 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Irx2P81066 474 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 NfiaQ02780 532 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gsdmc4Q3TR54 480 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nlrp4fQ66X05 959 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Lrrc14Q8VC16 493 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ces1fQ91WU0 561 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mccc1Q99MR8 717 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rabgef1Q9JM13 491 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mettl1Q9Z120 268 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 PkmP52480 531 aaKnown RBP10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Actr2P61161 394 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Npr3P70180 536 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cog7Q3UM29 770 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ssxb10Q6XAR7 170 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfr1415Q7TQS4 311 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Chtf18Q8BIW9 969 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Thap3Q8BJ25 218 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfr1416Q8VGU4 312 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 IscuQ9D7P6 168 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Morc3F7BJB9 942 aaKnown RBP10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 ArP19091 899 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cyfip2Q5SQX6 1253 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmc3Q7TQ69 1130 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 NrcamQ810U4 1256 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 3830417A13RikQ8BQJ2 303 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pgm5Q8BZF8 567 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gnl3Q8CI11 538 aaKnown RBP10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Unc5bQ8K1S3 945 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfr1494Q8VGP8 315 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 IrgqQ8VIM9 583 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ophn1Q99J31 802 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 PrameQ9D4Z5 464 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gins2Q9D600 185 aa10.85□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Itsn1Q9Z0R4 1714 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pik3c2aQ61194 1686 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm3424L7N298 263 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm8246M0QWX9 263 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Celf4Q7TSY6 486 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Vmn2r43Q80Z08 845 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sun2Q8BJS4 731 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Klhl36Q8R124 613 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Wrap53Q8VC51 532 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Txndc5Q91W90 417 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Bhmt2Q91WS4 363 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 ToporslQ9D2F8 683 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Slc5a4aQ9ET37 656 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ift172Q6VH22 1749 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccdc144bE9PVZ3 520 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Scgb2b19J3QM75 112 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 HelqQ2VPA6 1069 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gngt2Q61017 69 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Dcaf8Q8N7N5 591 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cgref1Q8R1U2 281 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 CalcbQ99MP3 130 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Kcnd2Q9Z0V2 630 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Robo1O89026 1612 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Apol11bE9PUZ0 337 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm15448F6PZL4 682 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 GclmO09172 274 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Top3aO70157 1003 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Xirp1O70373 1129 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tgfb2P27090 414 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Kif5aP33175 1027 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Serpinb6Q60854 378 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 HiraQ61666 1015 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 SugctQ7TNE1 436 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Kbtbd3Q8BHI4 607 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arhgap18Q8K0Q5 663 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mrpl47Q8K2Y7 252 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rpa1Q8VEE4 623 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pgm1Q9D0F9 562 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gtf3c6Q9D8P7 227 aa10.84□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nudt12Q9DCN1 462 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms