RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Brd9Q3UQU0 596 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tcf4Q60722 670 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gstt2Q61133 244 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Dusp4Q8BFV3 398 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 TbckQ8BM85 762 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tmco6Q8BQX5 494 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 PaoxQ8C0L6 504 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 WdpcpQ8C456 722 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 AdigQ8R400 80 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Hsf2bpQ9D4G2 338 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sv2aQ9JIS5 742 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Znf536Q8K083 1302 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Myo5aQ99104 1853 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 JrklB2RRL2 523 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zfp457L7N1X4 647 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Vmn2r15L7N2A0 855 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Dhx15O35286 795 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ccnd2P30280 289 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kif5aP33175 1027 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zfyve27Q3TXX3 415 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rufy4Q3TYX8 563 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 E2f8Q58FA4 860 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rgl2Q61193 778 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Parp6Q6P6P7 630 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Trerf1Q8BXJ2 1205 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Uba6Q8C7R4 1053 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Hectd2Q8CDU6 774 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sec63Q8VHE0 760 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Mrpl11Q9CQF0 192 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ddx24Q9ESV0 857 aaKnown RBP14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Myoz2Q9JJW5 264 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Prmt2Q9R144 448 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kif9Q9WV04 790 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tll2Q9WVM6 1012 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 NynrinQ5DTZ0 1840 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ttll6A4Q9E8 822 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pdha1P35486 390 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rhox5P52651 210 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Col9a2Q07643 688 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Calb2Q08331 271 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Upf3bQ3ULL6 472 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Lamc2Q61092 1191 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Raver2Q7TPD6 673 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cabs1Q8C633 391 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Myef2Q8C854 591 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Serpinb13Q8CDC0 389 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Trim68Q8K243 485 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Med15Q924H2 789 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Foxp3Q99JB6 429 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ptdss1Q99LH2 473 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 YwhabQ9CQV8 246 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 PrameQ9D4Z5 464 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Mrpl2Q9D773 306 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tgm5Q9D7I9 724 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 JmyQ9QXM1 983 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 CtsfQ9R013 462 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Extl3Q9WVL6 918 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Spata31d1aE9QA35 1336 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zfp612A0A1D5RMC2 672 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Card9A2AIV8 536 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Spata31d1dE9Q5W2 1247 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kcnn2P58390 839 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sfi1Q3UZY0 1216 aaKnown RBP14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Grm6Q5NCH9 871 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sh3rf1Q69ZI1 892 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Vmn2r26Q6TAC4 855 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ccdc169Q8BXX9 214 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Terb2Q9D494 218 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rsrc1Q9DBU6 334 aa14.24□□□□□ -0.13
Nup88-201ENSMUST00000035283 MipepA6H611 711 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 St3gal1P54751 337 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Psmc4P54775 418 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rit2P70425 217 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Fam92bQ3V2J0 292 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tmem65Q4VAE3 234 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Mea1Q64327 174 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ankrd13dQ6PD24 605 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Smg5Q6ZPY2 1017 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tmem161bQ8C2L6 487 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gnl3Q8CI11 538 aaKnown RBP14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ugt3a2Q8JZZ0 523 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Arhgap18Q8K0Q5 663 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 OlahQ8R197 265 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pcdhb12Q91Y07 789 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Subh2bvQ9D9Z7 123 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gabbr1Q9WV18 960 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Col11a2Q64739 1736 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gm9774A0A0A6YVU8 407 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 NumblO08919 604 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rpl21O09167 160 aaKnown RBP14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Eef1bO70251 225 aaKnown RBP14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tph1P17532 447 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Irf8P23611 424 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tulp2P46686 562 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cav1P49817 178 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cyp3a11Q64459 504 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Orai3Q6P8G8 290 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ankfy1Q810B6 1169 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Camkk2Q8C078 588 aa14.23□□□□□ -0.13
Nup88-201ENSMUST00000035283 Stxbp5Q8K400 1152 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms