RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Dync1li1Q8R1Q8 523 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Caap1Q8VDY9 356 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ddx56Q9D0R4 546 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ascc1Q9D8Z1 356 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Eif2ak3Q9Z2B5 1114 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 TprnA2AI08 749 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Tada2bD3Z4Z0 420 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm17019K7N6W5 255 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ppp4r3cQ3V0Y1 813 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Arhgap26Q6ZQ82 814 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Armc12Q80X86 340 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Spata21Q8BHW6 681 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Strip1Q8C079 837 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Polr3fQ921X6 316 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Atp6v1b2P62814 511 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gcnt1Q09324 428 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Lmntd2Q0VET5 664 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ush1gQ80T11 461 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Tbk1Q9WUN2 729 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm29554A0A087WNW4 188 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 AvenQ9D9K3 342 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Mrpl46Q9EQI8 283 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Znf711A2ANX9 761 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rsrc2A2RTL5 376 aaKnown RBP24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Apoa4P06728 395 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Spdye4aQ5IBH6 268 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Zfp454Q80Y34 536 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gpsm2Q8VDU0 679 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Trpd52l3Q9CQ14 231 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rnf123Q5XPI3 1314 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Nlrp9bQ66X22 1003 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Stx18Q8VDS8 334 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Smok2bQ9QYZ3 484 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Smok2aQ9QYZ6 504 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rusc2Q80U22 1514 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Usp31E9Q6Y8 1344 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rbm12b1Q80YR9 836 aaKnown RBP24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ttc7aQ8BGB2 858 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ppp1r37Q8BKR5 712 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ttc39bQ8BYY4 617 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Cyp39a1Q9JKJ9 470 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Kansl3A2RSY1 903 aaKnown RBP24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Efna5O08543 228 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Aco1P28271 889 aaKnown RBP24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Mettl25Q6NXH8 597 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Olfr832Q7TRG9 312 aa24.27■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ak9G3UYQ4 1894 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Nmt2O70311 529 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 UmpsP13439 481 aaKnown RBP24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccndbp1Q3TVC7 356 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Armc7Q3UJZ3 198 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Smarca1Q6PGB8 1046 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Pnma1Q8C1C8 353 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Hspbp1Q99P31 357 aaKnown RBP24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Scgb2b20Q9JI02 112 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Acot3Q9QYR7 432 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 CemipQ8BI06 1361 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Prdm2A2A7B5 1709 aaKnown RBP24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Psma2P49722 234 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Atp13a5Q3TYU2 1216 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Trim12aQ99PQ1 284 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Chi3l1Q61362 389 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Fcho1Q8K285 873 aa24.26■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Zfp788E9Q980 884 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 PtpreP49446 699 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ankrd42Q3V096 527 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Klhdc10Q6PAR0 439 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Usp27Q8CEG8 438 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Rnf8Q8VC56 488 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 GzmnQ920S1 248 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Terb2Q9D494 218 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Bcl10Q9Z0H7 233 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Krt16Q9Z2K1 469 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Gm5152L7N200 190 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Sipa1P46062 1037 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccna2P51943 422 aaKnown RBP24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Tmem109Q3UBX0 243 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Stip1Q60864 543 aaKnown RBP24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccdc85bQ6PDY0 202 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ccdc77Q9CZH8 489 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Deaf1Q9Z1T5 566 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 InhbeO08717 350 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cct7P80313 544 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Usp13Q5BKP2 858 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Tnfaip2Q61333 691 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Plagl2Q925T4 496 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ppef2O35385 757 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Trappc3O55013 180 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Mill1Q8HWE7 395 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Stx5Q8K1E0 355 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cd2apQ9JLQ0 637 aa24.25■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Cdo1P60334 200 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Rab6bP61294 208 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Pstpip1P97814 415 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Ppp1r13lQ5I1X5 824 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 GanQ8CA72 597 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Trip4Q9QXN3 581 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Zfand4D3Z3C6 739 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Olfr1415Q7TQS4 311 aa24.24■■□□□ 1.47
Sh3rf1-201ENSMUST00000034060 Znf426Q8R1D1 550 aa24.24■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms