RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YHR035WP38769 630 aa1.37□□□□□ -2.19
CTF4YPR135W MTW1P39731 289 aa1.37□□□□□ -2.19
CTF4YPR135W CIN2P46670 268 aa1.37□□□□□ -2.19
CTF4YPR135W SFH5P47008 294 aa1.37□□□□□ -2.19
CTF4YPR135W RNY1Q02933 434 aaKnown RBP1.37□□□□□ -2.19
CTF4YPR135W SNX41Q04053 625 aa1.37□□□□□ -2.19
CTF4YPR135W YMR226CQ05016 267 aaKnown RBP1.37□□□□□ -2.19
CTF4YPR135W FRE8Q12209 686 aa1.37□□□□□ -2.19
CTF4YPR135W YPL229WQ99395 206 aa1.37□□□□□ -2.19
CTF4YPR135W TPI1P00942 248 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W MRS3P10566 314 aa1.36□□□□□ -2.19
CTF4YPR135W PHO80P20052 293 aa1.36□□□□□ -2.19
CTF4YPR135W SSO1P32867 290 aa1.36□□□□□ -2.19
CTF4YPR135W SPT4P32914 102 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W ECM8P38246 354 aa1.36□□□□□ -2.19
CTF4YPR135W GRE3P38715 327 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
CTF4YPR135W YHR127WP38833 243 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W IKI1P38874 309 aa1.36□□□□□ -2.19
CTF4YPR135W THO1P40040 218 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W YIL001WP40560 513 aa1.36□□□□□ -2.19
CTF4YPR135W YIR020CP40575 100 aa1.36□□□□□ -2.19
CTF4YPR135W IDP2P41939 412 aa1.36□□□□□ -2.19
CTF4YPR135W MGA1P53050 456 aa1.36□□□□□ -2.19
CTF4YPR135W YNL247WP53852 767 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W EBS1Q03466 884 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W YDL199CQ12407 687 aa1.36□□□□□ -2.19
CTF4YPR135W FOL3Q12676 427 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W YCR024C-BQ3E7Z8 88 aa1.36□□□□□ -2.19
CTF4YPR135W RPL27AP0C2H6 136 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W RPL27BP0C2H7 136 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W MRP1P10662 321 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W TIP20P33891 701 aa1.36□□□□□ -2.19
CTF4YPR135W CHK1P38147 527 aa1.36□□□□□ -2.19
CTF4YPR135W YHL044WP38727 235 aa1.36□□□□□ -2.19
CTF4YPR135W GGC1P38988 300 aa1.36□□□□□ -2.19
CTF4YPR135W SOP4P39543 234 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W SEC72P39742 193 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W YFL067WP43537 175 aa1.36□□□□□ -2.19
CTF4YPR135W ADO1P47143 340 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W TPN1P53099 579 aa1.36□□□□□ -2.19
CTF4YPR135W YGL159WP53110 370 aa1.36□□□□□ -2.19
CTF4YPR135W VPS71Q03433 280 aa1.36□□□□□ -2.19
CTF4YPR135W SCS7Q03529 384 aa1.36□□□□□ -2.19
CTF4YPR135W MFG1Q07684 458 aa1.36□□□□□ -2.19
CTF4YPR135W RDL2Q08742 149 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W VIK1Q12045 647 aa1.36□□□□□ -2.19
CTF4YPR135W CYC3P06182 269 aa1.36□□□□□ -2.19
CTF4YPR135W CBP6P07253 162 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W PET494P07390 489 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W SNF6P18888 332 aa1.36□□□□□ -2.19
CTF4YPR135W RNA15P25299 296 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W RPL16BP26785 198 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W MEI4P29467 408 aa1.36□□□□□ -2.19
CTF4YPR135W AGA1P32323 725 aa1.36□□□□□ -2.19
CTF4YPR135W PDC2P32896 925 aa1.36□□□□□ -2.19
CTF4YPR135W SRY1P36007 326 aa1.36□□□□□ -2.19
CTF4YPR135W YKL075CP36083 450 aa1.36□□□□□ -2.19
CTF4YPR135W PRY2P36110 329 aa1.36□□□□□ -2.19
CTF4YPR135W RFT1P38206 574 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W BMT5P40493 336 aa1.36□□□□□ -2.19
CTF4YPR135W MRPL49P40858 161 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W RPL10P41805 221 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W NCA3P46955 337 aa1.36□□□□□ -2.19
CTF4YPR135W PGU1P47180 361 aa1.36□□□□□ -2.19
CTF4YPR135W SBH2P52871 88 aa1.36□□□□□ -2.19
CTF4YPR135W POP6P53218 158 aa1.36□□□□□ -2.19
CTF4YPR135W TPC1P53257 314 aa1.36□□□□□ -2.19
CTF4YPR135W MSO1P53604 210 aaKnown RBP1.36□□□□□ -2.19
CTF4YPR135W TDA1Q03533 586 aa1.36□□□□□ -2.19
CTF4YPR135W SFH1Q06168 426 aa1.36□□□□□ -2.19
CTF4YPR135W YPR174CQ06616 221 aaPredicted RBP1.36□□□□□ -2.19
CTF4YPR135W YOL029CQ08187 201 aa1.36□□□□□ -2.19
CTF4YPR135W PPT2Q12036 173 aa1.36□□□□□ -2.19
CTF4YPR135W MCT1Q12283 360 aa1.36□□□□□ -2.19
CTF4YPR135W RPL20AP0CX23 172 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W RPL20BP0CX24 172 aaPredicted RBP1.35□□□□□ -2.19
CTF4YPR135W YFL068WP0CX99 160 aa1.35□□□□□ -2.19
CTF4YPR135W YLL066W-AP0CY00 160 aa1.35□□□□□ -2.19
CTF4YPR135W YLL067W-AP0CY01 160 aa1.35□□□□□ -2.19
CTF4YPR135W YAK1P14680 807 aa1.35□□□□□ -2.19
CTF4YPR135W ITR2P30606 609 aa1.35□□□□□ -2.19
CTF4YPR135W TPS2P31688 896 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W AST1P35183 429 aa1.35□□□□□ -2.19
CTF4YPR135W JEN1P36035 616 aa1.35□□□□□ -2.19
CTF4YPR135W RIB5P38145 238 aa1.35□□□□□ -2.19
CTF4YPR135W AVT5P38176 459 aa1.35□□□□□ -2.19
CTF4YPR135W AME1P38313 324 aa1.35□□□□□ -2.19
CTF4YPR135W RCK1P38622 512 aa1.35□□□□□ -2.19
CTF4YPR135W ECM14P38836 430 aa1.35□□□□□ -2.19
CTF4YPR135W MDM31P38880 579 aa1.35□□□□□ -2.19
CTF4YPR135W POG1P40473 351 aa1.35□□□□□ -2.19
CTF4YPR135W YIL067CP40514 678 aa1.35□□□□□ -2.19
CTF4YPR135W YIL029CP40538 142 aa1.35□□□□□ -2.19
CTF4YPR135W OST1P41543 476 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W YJR149WP47177 404 aa1.35□□□□□ -2.19
CTF4YPR135W YPT32P51996 222 aaKnown RBP1.35□□□□□ -2.19
CTF4YPR135W TOS8P53147 276 aa1.35□□□□□ -2.19
CTF4YPR135W GET1P53192 235 aa1.35□□□□□ -2.19
CTF4YPR135W SLX9P53251 210 aaPredicted RBP1.35□□□□□ -2.19
CTF4YPR135W SYF2P53277 215 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 412.4 ms