RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W ERP4Q12450 207 aa0.01□□□□□ -2.41
PRP39YML046W YEL009C-AA0A023PZF2 135 aa0□□□□□ -2.41
PRP39YML046W CDC7P06243 507 aa0□□□□□ -2.41
PRP39YML046W PDX1P16451 410 aa0□□□□□ -2.41
PRP39YML046W HXT2P23585 541 aa0□□□□□ -2.41
PRP39YML046W IMP1P28627 190 aa0□□□□□ -2.41
PRP39YML046W SUA7P29055 345 aaPredicted RBP0□□□□□ -2.41
PRP39YML046W ECM13P38195 257 aa0□□□□□ -2.41
PRP39YML046W IML3P38265 245 aa0□□□□□ -2.41
PRP39YML046W CUE1P38428 203 aa0□□□□□ -2.41
PRP39YML046W GLE2P40066 365 aa0□□□□□ -2.41
PRP39YML046W AVT6P40074 448 aa0□□□□□ -2.41
PRP39YML046W YER135CP40082 130 aa0□□□□□ -2.41
PRP39YML046W YFL051CP43552 160 aa0□□□□□ -2.41
PRP39YML046W RPL37BP51402 88 aaKnown RBP0□□□□□ -2.41
PRP39YML046W FCF1Q05498 189 aaPredicted RBP0□□□□□ -2.41
PRP39YML046W YOR343CQ12484 108 aa0□□□□□ -2.41
PRP39YML046W GRX2P17695 143 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W YSR3P23501 404 aa-0.01□□□□□ -2.41
PRP39YML046W RPL5P26321 297 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W YKL063CP35725 167 aa-0.01□□□□□ -2.41
PRP39YML046W NPT1P39683 429 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W RPL37AP49166 88 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W EMC4P53073 190 aa-0.01□□□□□ -2.41
PRP39YML046W VAC14Q06708 880 aa-0.01□□□□□ -2.41
PRP39YML046W PRP11Q07350 266 aaPredicted RBP-0.01□□□□□ -2.41
PRP39YML046W YLL007CQ07799 665 aa-0.01□□□□□ -2.41
PRP39YML046W YOR268CQ08734 132 aa-0.01□□□□□ -2.41
PRP39YML046W RDL2Q08742 149 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W AIM45Q12480 344 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W KIN28P06242 306 aa-0.01□□□□□ -2.41
PRP39YML046W CDC31P06704 161 aaKnown RBP-0.01□□□□□ -2.41
PRP39YML046W YHR212W-AP0CX91 67 aa-0.01□□□□□ -2.41
PRP39YML046W RNA15P25299 296 aaPredicted RBP-0.01□□□□□ -2.41
PRP39YML046W DAL80P26343 269 aa-0.01□□□□□ -2.41
PRP39YML046W KDX1P36005 433 aa-0.01□□□□□ -2.41
PRP39YML046W MRPL37P36532 105 aa-0.01□□□□□ -2.41
PRP39YML046W PET8P38921 284 aa-0.01□□□□□ -2.41
PRP39YML046W SUR2P38992 349 aa-0.01□□□□□ -2.41
PRP39YML046W VTC1P40046 129 aaRIP-Chip data-0.01□□□□□ -2.41not detected
PRP39YML046W DDI1P40087 428 aa-0.01□□□□□ -2.41
PRP39YML046W IBA57P47158 497 aa-0.01□□□□□ -2.41
PRP39YML046W UTR1P21373 530 aa-0.02□□□□□ -2.41
PRP39YML046W RBK1P25332 333 aa-0.02□□□□□ -2.41
PRP39YML046W YCR025CP25352 136 aa-0.02□□□□□ -2.41
PRP39YML046W SRL3P36167 246 aa-0.02□□□□□ -2.41
PRP39YML046W MRPL3P36516 390 aa-0.02□□□□□ -2.41
PRP39YML046W SPT8P38915 602 aa-0.02□□□□□ -2.41
PRP39YML046W MLH1P38920 769 aa-0.02□□□□□ -2.41
PRP39YML046W KRE29P40026 464 aa-0.02□□□□□ -2.41
PRP39YML046W RSM25P40496 264 aa-0.02□□□□□ -2.41
PRP39YML046W RPE1P46969 238 aa-0.02□□□□□ -2.41
PRP39YML046W YJR079WP47126 109 aa-0.02□□□□□ -2.41
PRP39YML046W EMC2P47133 292 aaKnown RBP-0.02□□□□□ -2.41
PRP39YML046W OST3P48439 350 aa-0.02□□□□□ -2.41
PRP39YML046W SWT21P53873 357 aaPredicted RBP-0.02□□□□□ -2.41
PRP39YML046W YPR147CQ06522 304 aaKnown RBP-0.02□□□□□ -2.41
PRP39YML046W RAF1Q06891 181 aa-0.02□□□□□ -2.41
PRP39YML046W MRPL23Q12487 163 aaPredicted RBP-0.02□□□□□ -2.41
PRP39YML046W ISD11Q6Q560 94 aa-0.02□□□□□ -2.41
PRP39YML046W RAS2P01120 322 aaKnown RBP-0.03□□□□□ -2.41
PRP39YML046W MSW1P04803 379 aa-0.03□□□□□ -2.41
PRP39YML046W RAD1P06777 1100 aa-0.03□□□□□ -2.41
PRP39YML046W GAL7P08431 366 aa-0.03□□□□□ -2.41
PRP39YML046W DCC1P25559 380 aa-0.03□□□□□ -2.41
PRP39YML046W FIP1P45976 327 aa-0.03□□□□□ -2.41
PRP39YML046W GTR2P53290 341 aa-0.03□□□□□ -2.41
PRP39YML046W YDR274CP87283 123 aa-0.03□□□□□ -2.41
PRP39YML046W LCL1Q02786 101 aa-0.03□□□□□ -2.41
PRP39YML046W MIX14Q04341 121 aa-0.03□□□□□ -2.41
PRP39YML046W YLR283WQ05867 314 aa-0.03□□□□□ -2.41
PRP39YML046W TAZ1Q06510 381 aa-0.03□□□□□ -2.41
PRP39YML046W YDL121CQ07541 149 aa-0.03□□□□□ -2.41
PRP39YML046W IRC23Q08416 157 aa-0.03□□□□□ -2.41
PRP39YML046W YOL107WQ12239 342 aa-0.03□□□□□ -2.41
PRP39YML046W PAR32Q12515 295 aaKnown RBP-0.03□□□□□ -2.41
PRP39YML046W RPS3P05750 240 aaKnown RBP-0.03□□□□□ -2.41
PRP39YML046W PET9P18239 318 aaKnown RBP-0.03□□□□□ -2.41
PRP39YML046W GPX1P36014 167 aa-0.03□□□□□ -2.41
PRP39YML046W JNM1P36224 373 aa-0.03□□□□□ -2.41
PRP39YML046W HSM3P38348 480 aa-0.03□□□□□ -2.41
PRP39YML046W HOC1P47124 396 aa-0.03□□□□□ -2.41
PRP39YML046W TPN1P53099 579 aa-0.03□□□□□ -2.41
PRP39YML046W DAD3P69850 94 aa-0.03□□□□□ -2.41
PRP39YML046W LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
PRP39YML046W YLR012CQ07927 99 aa-0.03□□□□□ -2.41
PRP39YML046W FRE6Q12473 712 aa-0.03□□□□□ -2.41
PRP39YML046W KTI11Q3E840 82 aa-0.03□□□□□ -2.41
PRP39YML046W RAD7P06779 565 aa-0.04□□□□□ -2.42
PRP39YML046W GCY1P14065 312 aaKnown RBP RIP-Chip data-0.04□□□□□ -2.42not detected
PRP39YML046W TOM40P23644 387 aaKnown RBP-0.04□□□□□ -2.42
PRP39YML046W YGL010WP25338 174 aa-0.04□□□□□ -2.42
PRP39YML046W HMX1P32339 317 aa-0.04□□□□□ -2.42
PRP39YML046W TCA17P32613 152 aa-0.04□□□□□ -2.42
PRP39YML046W HUA1P40325 198 aa-0.04□□□□□ -2.42
PRP39YML046W SRB7P47822 140 aa-0.04□□□□□ -2.42
PRP39YML046W MMS2P53152 137 aa-0.04□□□□□ -2.42
PRP39YML046W YGR016WP53209 190 aa-0.04□□□□□ -2.42
PRP39YML046W YNL046WP53956 172 aa-0.04□□□□□ -2.42
PRP39YML046W SPG4Q04438 115 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms