RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YOR186WQ08560 144 aa1.06□□□□□ -2.24
RPL40BYKR094C YPL257WQ08974 193 aa1.06□□□□□ -2.24
RPL40BYKR094C GET4Q12125 312 aa1.06□□□□□ -2.24
RPL40BYKR094C GEP5Q12393 293 aa1.06□□□□□ -2.24
RPL40BYKR094C DCN1Q12395 269 aa1.06□□□□□ -2.24
RPL40BYKR094C FKS1P38631 1876 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C YLR462WO13556 202 aa1.05□□□□□ -2.24
RPL40BYKR094C HTB1P02293 131 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C HTB2P02294 131 aa1.05□□□□□ -2.24
RPL40BYKR094C RAD10P06838 210 aa1.05□□□□□ -2.24
RPL40BYKR094C CDC33P07260 213 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C RPL27AP0C2H6 136 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C RPL27BP0C2H7 136 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C COS2P0CX12 379 aa1.05□□□□□ -2.24
RPL40BYKR094C COS3P0CX13 379 aa1.05□□□□□ -2.24
RPL40BYKR094C RPS23AP0CX29 145 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C RPS23BP0CX30 145 aa1.05□□□□□ -2.24
RPL40BYKR094C MATALPHA2P0CY08 210 aa1.05□□□□□ -2.24
RPL40BYKR094C HMLALPHA2P0CY09 210 aa1.05□□□□□ -2.24
RPL40BYKR094C ZWF1P11412 505 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C URA6P15700 204 aa1.05□□□□□ -2.24
RPL40BYKR094C ERG24P32462 438 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C MGM101P32787 269 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C RCN1P36054 211 aa1.05□□□□□ -2.24
RPL40BYKR094C YKL075CP36083 450 aa1.05□□□□□ -2.24
RPL40BYKR094C COS8P38723 381 aa1.05□□□□□ -2.24
RPL40BYKR094C YAR068WP39564 161 aa1.05□□□□□ -2.24
RPL40BYKR094C YEL075CP39972 122 aa1.05□□□□□ -2.24
RPL40BYKR094C FIS1P40515 155 aa1.05□□□□□ -2.24
RPL40BYKR094C ADO1P47143 340 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C YJR141WP47172 347 aaPredicted RBP1.05□□□□□ -2.24
RPL40BYKR094C OST3P48439 350 aa1.05□□□□□ -2.24
RPL40BYKR094C NUP57P48837 541 aa1.05□□□□□ -2.24
RPL40BYKR094C BRR6P53062 197 aa1.05□□□□□ -2.24
RPL40BYKR094C SYF2P53277 215 aaPredicted RBP1.05□□□□□ -2.24
RPL40BYKR094C CUS2P53830 285 aaPredicted RBP1.05□□□□□ -2.24
RPL40BYKR094C YML096WQ04489 525 aa1.05□□□□□ -2.24
RPL40BYKR094C FAR8Q05040 523 aa1.05□□□□□ -2.24
RPL40BYKR094C YPL247CQ12523 523 aa1.05□□□□□ -2.24
RPL40BYKR094C YKL183C-AQ3E765 70 aa1.05□□□□□ -2.24
RPL40BYKR094C LSO2Q3E772 92 aaKnown RBP1.05□□□□□ -2.24
RPL40BYKR094C YBL112CQ3E7Y4 105 aa1.05□□□□□ -2.24
RPL40BYKR094C YOR020W-AQ3E824 90 aa1.05□□□□□ -2.24
RPL40BYKR094C HTL1Q9URQ5 78 aa1.05□□□□□ -2.24
RPL40BYKR094C HIS3P06633 220 aa1.04□□□□□ -2.24
RPL40BYKR094C SPT3P06844 337 aa1.04□□□□□ -2.24
RPL40BYKR094C MET2P08465 486 aa1.04□□□□□ -2.24
RPL40BYKR094C DSF1P0CX08 502 aa1.04□□□□□ -2.24
RPL40BYKR094C YNR073CP0CX09 502 aa1.04□□□□□ -2.24
RPL40BYKR094C SNA3P14359 133 aa1.04□□□□□ -2.24
RPL40BYKR094C VMA11P32842 164 aa1.04□□□□□ -2.24
RPL40BYKR094C NTF2P33331 125 aaKnown RBP1.04□□□□□ -2.24
RPL40BYKR094C YPT52P36018 234 aaKnown RBP1.04□□□□□ -2.24
RPL40BYKR094C YKR032WP36127 104 aa1.04□□□□□ -2.24
RPL40BYKR094C MSA2P36157 363 aa1.04□□□□□ -2.24
RPL40BYKR094C ECM13P38195 257 aa1.04□□□□□ -2.24
RPL40BYKR094C TRM5P38793 499 aa1.04□□□□□ -2.24
RPL40BYKR094C RTC3P38804 111 aaPredicted RBP1.04□□□□□ -2.24
RPL40BYKR094C ARC15P40518 154 aaRIP-Chip data1.04□□□□□ -2.24not detected
RPL40BYKR094C CAT5P41735 233 aa1.04□□□□□ -2.24
RPL40BYKR094C OST2P46964 130 aa1.04□□□□□ -2.24
RPL40BYKR094C GON7P46984 123 aa1.04□□□□□ -2.24
RPL40BYKR094C IRC18P47056 224 aa1.04□□□□□ -2.24
RPL40BYKR094C YJL016WP47072 561 aa1.04□□□□□ -2.24
RPL40BYKR094C BXI1P48558 297 aa1.04□□□□□ -2.24
RPL40BYKR094C CWC23P52868 283 aaPredicted RBP1.04□□□□□ -2.24
RPL40BYKR094C MDM34P53083 459 aa1.04□□□□□ -2.24
RPL40BYKR094C YGL159WP53110 370 aa1.04□□□□□ -2.24
RPL40BYKR094C YGL088WP53151 121 aa1.04□□□□□ -2.24
RPL40BYKR094C ALG13P53178 202 aa1.04□□□□□ -2.24
RPL40BYKR094C YNL046WP53956 172 aa1.04□□□□□ -2.24
RPL40BYKR094C RGM1Q00453 211 aa1.04□□□□□ -2.24
RPL40BYKR094C ABF2Q02486 183 aa1.04□□□□□ -2.24
RPL40BYKR094C GRX3Q03835 250 aa1.04□□□□□ -2.24
RPL40BYKR094C YMR114CQ04471 368 aaKnown RBP1.04□□□□□ -2.24
RPL40BYKR094C INM2Q05533 292 aa1.04□□□□□ -2.24
RPL40BYKR094C YPR172WQ06608 200 aa1.04□□□□□ -2.24
RPL40BYKR094C MDM32Q12171 622 aa1.04□□□□□ -2.24
RPL40BYKR094C SAS5Q99314 248 aa1.04□□□□□ -2.24
RPL40BYKR094C FCY2P17064 533 aa1.03□□□□□ -2.24
RPL40BYKR094C ERD2P18414 219 aa1.03□□□□□ -2.24
RPL40BYKR094C TOM40P23644 387 aaKnown RBP1.03□□□□□ -2.24
RPL40BYKR094C RSA4P25382 515 aaKnown RBP1.03□□□□□ -2.24
RPL40BYKR094C EHD3P28817 500 aa1.03□□□□□ -2.24
RPL40BYKR094C SKG1P36169 355 aa1.03□□□□□ -2.24
RPL40BYKR094C URA8P38627 578 aaPredicted RBP1.03□□□□□ -2.24
RPL40BYKR094C DOG2P38773 246 aa1.03□□□□□ -2.24
RPL40BYKR094C DOG1P38774 246 aa1.03□□□□□ -2.24
RPL40BYKR094C IKI1P38874 309 aa1.03□□□□□ -2.24
RPL40BYKR094C RMD6P39975 231 aa1.03□□□□□ -2.24
RPL40BYKR094C YER188WP40103 239 aa1.03□□□□□ -2.24
RPL40BYKR094C YJR149WP47177 404 aa1.03□□□□□ -2.24
RPL40BYKR094C YGL034CP53186 121 aa1.03□□□□□ -2.24
RPL40BYKR094C HOP2P53187 214 aa1.03□□□□□ -2.24
RPL40BYKR094C GET1P53192 235 aa1.03□□□□□ -2.24
RPL40BYKR094C YGR026WP53217 278 aa1.03□□□□□ -2.24
RPL40BYKR094C GTR2P53290 341 aa1.03□□□□□ -2.24
RPL40BYKR094C YMR279CQ03263 540 aa1.03□□□□□ -2.24
RPL40BYKR094C MIX17Q03667 156 aa1.03□□□□□ -2.24
RPL40BYKR094C YDR248CQ03786 193 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms