RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	AIM17	P23180	465 aa	Known RBP	4.86	□□□□□ -1.63
RPT1	YKL145W	YCR102C	P25608	368 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	ECT1	P33412	323 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	APD1	P38281	316 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	REE1	P40893	198 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	ECO1	P43605	281 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	SAY1	P53324	424 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	YDR209C	Q03480	137 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	YDR249C	Q03787	373 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	RDL2	Q08742	149 aa	Known RBP	4.86	□□□□□ -1.63
RPT1	YKL145W	ACF2	Q12168	779 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	YOR343C	Q12484	108 aa		4.86	□□□□□ -1.63
RPT1	YKL145W	FAS1	P07149	2051 aa	Known RBP	4.85	□□□□□ -1.63
RPT1	YKL145W	IRA1	P18963	3092 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	YEL009C-A	A0A023PZF2	135 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	RPL18A	P0CX49	186 aa	Known RBP	4.85	□□□□□ -1.63
RPT1	YKL145W	RPL18B	P0CX50	186 aa	Known RBP	4.85	□□□□□ -1.63
RPT1	YKL145W	YHR214C-D	P0CX93	97 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	SCO1	P23833	295 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	GIT1	P25346	518 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	PPA2	P28239	310 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	EHD3	P28817	500 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	FLO10	P36170	1169 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	SHO1	P40073	367 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	TIM21	P53220	239 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	MKC7	P53379	596 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	NUP116	Q02630	1113 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	SDC1	Q03323	175 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	GPI17	Q04080	534 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	SSK1	Q07084	712 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	YDL114W	Q07530	308 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	MSH5	Q12175	901 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	SET6	Q12529	373 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	YOR032W-A	Q8TGS1	66 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	FSH3	Q99369	266 aa		4.85	□□□□□ -1.63
RPT1	YKL145W	BRR2	P32639	2163 aa	Known RBP	4.84	□□□□□ -1.63
RPT1	YKL145W	YAL064W-B	O13512	126 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	RPN13	O13563	156 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	ARG80	P07249	177 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YFR010W-A	P0C5N0	62 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YCR007C	P25354	239 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	PUT3	P25502	979 aa	Predicted RBP	4.84	□□□□□ -1.63
RPT1	YKL145W	RSM22	P36056	628 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	FMP23	P38231	175 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	CHS7	P38843	316 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YJL218W	P40892	196 aa	Known RBP	4.84	□□□□□ -1.63
RPT1	YKL145W	PHB1	P40961	287 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YAE1	P47118	141 aa	Predicted RBP	4.84	□□□□□ -1.63
RPT1	YKL145W	PAU12	P53343	120 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	SCS7	Q03529	384 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YMR252C	Q04814	134 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	YPR147C	Q06522	304 aa	Known RBP	4.84	□□□□□ -1.63
RPT1	YKL145W	HMS1	Q12398	434 aa		4.84	□□□□□ -1.63
RPT1	YKL145W	SIR2	P06700	562 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	GDH1	P07262	454 aa	Known RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	YLL053C	P0CD98	152 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	MDH2	P22133	377 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	EXG1	P23776	448 aa	Known RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	FUN26	P31381	517 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	ARO4	P32449	370 aa	Known RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	ZUO1	P32527	433 aa	Known RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	PDR3	P33200	976 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	COS9	P36034	407 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	YBR063C	P38083	404 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	PAU24	P38155	120 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	YIL169C	P40442	995 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	CWC23	P52868	283 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	PCP1	P53259	346 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	ASI3	P53983	676 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	MRP51	Q02950	344 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	YPL039W	Q03080	316 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	BNA7	Q04066	261 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	HNT3	Q08702	217 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	YPL278C	Q08990	100 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RPT1	YKL145W	TIR4	Q12218	487 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT1	YKL145W	YLR099W-A	Q3E798	87 aa		4.83	□□□□□ -1.64
RPT1	YKL145W	STE18	P18852	110 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	PRE7	P23724	241 aa	Known RBP	4.82	□□□□□ -1.64
RPT1	YKL145W	SUA5	P32579	426 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	TOA2	P32774	122 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	YBR137W	P38276	179 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	RFC4	P40339	323 aa	Known RBP	4.82	□□□□□ -1.64
RPT1	YKL145W	GDS1	P41913	522 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	YGL260W	P53056	76 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	YDR102C	Q03864	110 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	CAC2	Q04199	468 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	MRPL51	Q06090	140 aa	Predicted RBP	4.82	□□□□□ -1.64
RPT1	YKL145W	CTS2	Q06350	511 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	YPR1	Q12458	312 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	SUS1	Q6WNK7	96 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	FLO9	P39712	1322 aa		4.82	□□□□□ -1.64
RPT1	YKL145W	AHC2	P25649	128 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	ZRT3	P34240	503 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	YHK8	P38776	514 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	YER085C	P40058	173 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	ATG18	P43601	500 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	PET191	Q02772	108 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	MRX8	Q05473	314 aa		4.81	□□□□□ -1.64
RPT1	YKL145W	NMA1	Q06178	401 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms