RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W HSP26P15992 214 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
DEG1YFL001W MGM101P32787 269 aaKnown RBP3.75□□□□□ -1.81
DEG1YFL001W CBT1P36038 271 aaPredicted RBP3.75□□□□□ -1.81
DEG1YFL001W EDC2P40023 145 aaPredicted RBP3.75□□□□□ -1.81
DEG1YFL001W YIL054WP40524 105 aa3.75□□□□□ -1.81
DEG1YFL001W YFH7P43591 353 aa3.75□□□□□ -1.81
DEG1YFL001W HAM1P47119 197 aaKnown RBP3.75□□□□□ -1.81
DEG1YFL001W YGL118CP53132 145 aa3.75□□□□□ -1.81
DEG1YFL001W CUS2P53830 285 aaPredicted RBP3.75□□□□□ -1.81
DEG1YFL001W TSA2Q04120 196 aa3.75□□□□□ -1.81
DEG1YFL001W INM2Q05533 292 aa3.75□□□□□ -1.81
DEG1YFL001W PEX10Q05568 337 aa3.75□□□□□ -1.81
DEG1YFL001W PLB3Q08108 686 aa3.75□□□□□ -1.81
DEG1YFL001W GET4Q12125 312 aa3.75□□□□□ -1.81
DEG1YFL001W KSS1P14681 368 aa3.74□□□□□ -1.81
DEG1YFL001W FUS3P16892 353 aaKnown RBP3.74□□□□□ -1.81
DEG1YFL001W PHO80P20052 293 aa3.74□□□□□ -1.81
DEG1YFL001W ASP1P38986 381 aaPredicted RBP3.74□□□□□ -1.81
DEG1YFL001W AVT6P40074 448 aa3.74□□□□□ -1.81
DEG1YFL001W PRE6P40303 254 aaKnown RBP3.74□□□□□ -1.81
DEG1YFL001W HOP2P53187 214 aa3.74□□□□□ -1.81
DEG1YFL001W SLX9P53251 210 aaPredicted RBP3.74□□□□□ -1.81
DEG1YFL001W YMR226CQ05016 267 aaKnown RBP3.74□□□□□ -1.81
DEG1YFL001W PCL1P24867 279 aa3.73□□□□□ -1.81
DEG1YFL001W KDX1P36005 433 aa3.73□□□□□ -1.81
DEG1YFL001W DBP7P36120 742 aaKnown RBP3.73□□□□□ -1.81
DEG1YFL001W HMT1P38074 348 aa3.73□□□□□ -1.81
DEG1YFL001W YHI9P38765 294 aa3.73□□□□□ -1.81
DEG1YFL001W RFC4P40339 323 aaKnown RBP3.73□□□□□ -1.81
DEG1YFL001W UFE1P41834 346 aa3.73□□□□□ -1.81
DEG1YFL001W MIC26P50087 233 aa3.73□□□□□ -1.81
DEG1YFL001W CWC23P52868 283 aaPredicted RBP3.73□□□□□ -1.81
DEG1YFL001W EFM5P53200 248 aaKnown RBP3.73□□□□□ -1.81
DEG1YFL001W YGR018CP53211 109 aa3.73□□□□□ -1.81
DEG1YFL001W RHO3Q00245 231 aaKnown RBP3.73□□□□□ -1.81
DEG1YFL001W HAL1Q01766 294 aa3.73□□□□□ -1.81
DEG1YFL001W PMD1P32634 1753 aa3.73□□□□□ -1.81
DEG1YFL001W ADH1P00330 348 aaKnown RBP3.72□□□□□ -1.81
DEG1YFL001W YKR104WP0CE69 306 aa3.72□□□□□ -1.81
DEG1YFL001W COS2P0CX12 379 aa3.72□□□□□ -1.81
DEG1YFL001W COS3P0CX13 379 aa3.72□□□□□ -1.81
DEG1YFL001W DPB2P24482 689 aaPredicted RBP3.72□□□□□ -1.81
DEG1YFL001W RPB9P27999 122 aa3.72□□□□□ -1.81
DEG1YFL001W ERG2P32352 222 aa3.72□□□□□ -1.81
DEG1YFL001W NTF2P33331 125 aaKnown RBP3.72□□□□□ -1.81
DEG1YFL001W SGE1P33335 543 aa3.72□□□□□ -1.81
DEG1YFL001W PHO89P38361 574 aa3.72□□□□□ -1.81
DEG1YFL001W YNL194CP40169 301 aa3.72□□□□□ -1.81
DEG1YFL001W COS4P43542 379 aa3.72□□□□□ -1.81
DEG1YFL001W SNZ3P43545 298 aa3.72□□□□□ -1.81
DEG1YFL001W SNZ2P53824 298 aa3.72□□□□□ -1.81
DEG1YFL001W AAH1P53909 347 aa3.72□□□□□ -1.81
DEG1YFL001W SNZ1Q03148 297 aa3.72□□□□□ -1.81
DEG1YFL001W SPG4Q04438 115 aa3.72□□□□□ -1.81
DEG1YFL001W MCH1Q07376 486 aa3.72□□□□□ -1.81
DEG1YFL001W TIR4Q12218 487 aaPredicted RBP3.72□□□□□ -1.81
DEG1YFL001W YPK2P18961 677 aa3.71□□□□□ -1.81
DEG1YFL001W COX10P21592 462 aa3.71□□□□□ -1.81
DEG1YFL001W CDC10P25342 322 aaKnown RBP3.71□□□□□ -1.81
DEG1YFL001W ASF2P32448 525 aaPredicted RBP3.71□□□□□ -1.81
DEG1YFL001W YHR127WP38833 243 aaKnown RBP3.71□□□□□ -1.81
DEG1YFL001W YER034WP40022 185 aaKnown RBP3.71□□□□□ -1.81
DEG1YFL001W SYS1P41544 203 aa3.71□□□□□ -1.81
DEG1YFL001W CPR7P47103 393 aa3.71□□□□□ -1.81
DEG1YFL001W YMR114CQ04471 368 aaKnown RBP3.71□□□□□ -1.81
DEG1YFL001W SCW10Q04951 389 aa3.71□□□□□ -1.81
DEG1YFL001W CDC123Q05791 360 aa3.71□□□□□ -1.81
DEG1YFL001W YPR147CQ06522 304 aaKnown RBP3.71□□□□□ -1.81
DEG1YFL001W BCY1P07278 416 aaKnown RBP3.7□□□□□ -1.82
DEG1YFL001W SSO1P32867 290 aa3.7□□□□□ -1.82
DEG1YFL001W GDH2P33327 1092 aaKnown RBP3.7□□□□□ -1.82
DEG1YFL001W YHL044WP38727 235 aa3.7□□□□□ -1.82
DEG1YFL001W FRT2P39734 528 aa3.7□□□□□ -1.82
DEG1YFL001W UFD1P53044 361 aa3.7□□□□□ -1.82
DEG1YFL001W SWT21P53873 357 aaPredicted RBP3.7□□□□□ -1.82
DEG1YFL001W SEI1Q06058 285 aa3.7□□□□□ -1.82
DEG1YFL001W YLR126CQ12288 251 aa3.7□□□□□ -1.82
DEG1YFL001W FIG2P25653 1609 aa3.7□□□□□ -1.82
DEG1YFL001W YDR157WA0A023PZE8 133 aa3.7□□□□□ -1.82
DEG1YFL001W SPT3P06844 337 aa3.7□□□□□ -1.82
DEG1YFL001W PRX1P34227 261 aaKnown RBP3.7□□□□□ -1.82
DEG1YFL001W TAF14P35189 244 aa3.7□□□□□ -1.82
DEG1YFL001W UTH1P36135 365 aa3.7□□□□□ -1.82
DEG1YFL001W DRE2P36152 348 aa3.7□□□□□ -1.82
DEG1YFL001W YRB2P40517 327 aa3.7□□□□□ -1.82
DEG1YFL001W MGA1P53050 456 aa3.7□□□□□ -1.82
DEG1YFL001W NSA1P53136 463 aaPredicted RBP3.7□□□□□ -1.82
DEG1YFL001W MRH4P53166 561 aa3.7□□□□□ -1.82
DEG1YFL001W CAX4P53223 239 aa3.7□□□□□ -1.82
DEG1YFL001W PIN3Q06449 215 aa3.7□□□□□ -1.82
DEG1YFL001W RRP40Q08285 240 aaKnown RBP3.7□□□□□ -1.82
DEG1YFL001W YRA1Q12159 226 aaKnown RBP3.7□□□□□ -1.82
DEG1YFL001W ATG5Q12380 294 aa3.7□□□□□ -1.82
DEG1YFL001W DCN1Q12395 269 aa3.7□□□□□ -1.82
DEG1YFL001W FLO11P08640 1367 aa3.69□□□□□ -1.82
DEG1YFL001W FAS2P19097 1887 aaKnown RBP3.69□□□□□ -1.82
DEG1YFL001W MATALPHA2P0CY08 210 aa3.69□□□□□ -1.82
DEG1YFL001W HMLALPHA2P0CY09 210 aa3.69□□□□□ -1.82
DEG1YFL001W LDB16P25587 256 aa3.69□□□□□ -1.82
DEG1YFL001W MCM22P47167 239 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms