RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W SNF6P18888 332 aa3.94□□□□□ -1.78
UBC6YER100W BMH1P29311 267 aaKnown RBP3.94□□□□□ -1.78
UBC6YER100W ECM13P38195 257 aa3.94□□□□□ -1.78
UBC6YER100W YER189WP40104 122 aa3.94□□□□□ -1.78
UBC6YER100W POG1P40473 351 aa3.94□□□□□ -1.78
UBC6YER100W FAR7P43592 221 aa3.94□□□□□ -1.78
UBC6YER100W YGR018CP53211 109 aa3.94□□□□□ -1.78
UBC6YER100W YPL039WQ03080 316 aa3.94□□□□□ -1.78
UBC6YER100W PIN3Q06449 215 aa3.94□□□□□ -1.78
UBC6YER100W MCH1Q07376 486 aa3.94□□□□□ -1.78
UBC6YER100W YNG1Q08465 219 aa3.94□□□□□ -1.78
UBC6YER100W YDL211CQ12121 372 aa3.94□□□□□ -1.78
UBC6YER100W TIM22Q12328 207 aa3.94□□□□□ -1.78
UBC6YER100W ADH1P00330 348 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W GCN3P14741 305 aa3.93□□□□□ -1.78
UBC6YER100W DBF2P22204 572 aa3.93□□□□□ -1.78
UBC6YER100W MRPL28P36527 147 aa3.93□□□□□ -1.78
UBC6YER100W TRM7P38238 310 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W SHG1P38337 142 aa3.93□□□□□ -1.78
UBC6YER100W SSH1P38353 490 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W GRE3P38715 327 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBC6YER100W PRE5P40302 234 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W MMS2P53152 137 aa3.93□□□□□ -1.78
UBC6YER100W RSM27P53305 110 aa3.93□□□□□ -1.78
UBC6YER100W LSO2Q3E772 92 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W IKI3Q06706 1349 aaKnown RBP3.93□□□□□ -1.78
UBC6YER100W COX5AP00424 153 aa3.92□□□□□ -1.78
UBC6YER100W PRY2P36110 329 aa3.92□□□□□ -1.78
UBC6YER100W SUR2P38992 349 aa3.92□□□□□ -1.78
UBC6YER100W YJL028WP47062 111 aa3.92□□□□□ -1.78
UBC6YER100W YGR067CP53243 804 aa3.92□□□□□ -1.78
UBC6YER100W SMD1Q02260 146 aaPredicted RBP3.92□□□□□ -1.78
UBC6YER100W YDR248CQ03786 193 aa3.92□□□□□ -1.78
UBC6YER100W EMI1Q04406 187 aa3.92□□□□□ -1.78
UBC6YER100W YPL150WQ12152 901 aa3.92□□□□□ -1.78
UBC6YER100W YBL112CQ3E7Y4 105 aa3.92□□□□□ -1.78
UBC6YER100W AUS1Q08409 1394 aa3.91□□□□□ -1.78
UBC6YER100W RPS19AP07280 144 aaKnown RBP3.91□□□□□ -1.78
UBC6YER100W RPS19BP07281 144 aaPredicted RBP3.91□□□□□ -1.78
UBC6YER100W FBA1P14540 359 aaKnown RBP3.91□□□□□ -1.78
UBC6YER100W PRE7P23724 241 aaKnown RBP3.91□□□□□ -1.78
UBC6YER100W SPS18P32572 300 aa3.91□□□□□ -1.78
UBC6YER100W APS1P35181 156 aa3.91□□□□□ -1.78
UBC6YER100W YBL081WP38180 368 aaKnown RBP3.91□□□□□ -1.78
UBC6YER100W ECM14P38836 430 aa3.91□□□□□ -1.78
UBC6YER100W BDH1P39714 382 aa3.91□□□□□ -1.78
UBC6YER100W YJR056CP47115 236 aa3.91□□□□□ -1.78
UBC6YER100W COQ5P49017 307 aa3.91□□□□□ -1.78
UBC6YER100W HAL1Q01766 294 aa3.91□□□□□ -1.78
UBC6YER100W TMC1Q08422 150 aaPredicted RBP3.91□□□□□ -1.78
UBC6YER100W MSA1Q08471 629 aa3.91□□□□□ -1.78
UBC6YER100W ISD11Q6Q560 94 aa3.91□□□□□ -1.78
UBC6YER100W YEL009C-AA0A023PZF2 135 aa3.9□□□□□ -1.79
UBC6YER100W YLR462WO13556 202 aa3.9□□□□□ -1.79
UBC6YER100W SEC4P07560 215 aaKnown RBP3.9□□□□□ -1.79
UBC6YER100W YOL163WP0CF20 169 aa3.9□□□□□ -1.79
UBC6YER100W SFC1P33303 322 aa3.9□□□□□ -1.79
UBC6YER100W CAF4P36130 643 aa3.9□□□□□ -1.79
UBC6YER100W SPL2P38839 148 aa3.9□□□□□ -1.79
UBC6YER100W YEL075CP39972 122 aa3.9□□□□□ -1.79
UBC6YER100W YPL264CQ08980 353 aa3.9□□□□□ -1.79
UBC6YER100W YPR011CQ12251 326 aa3.9□□□□□ -1.79
UBC6YER100W YPL247CQ12523 523 aa3.9□□□□□ -1.79
UBC6YER100W CUP2P15315 225 aa3.89□□□□□ -1.79
UBC6YER100W PCL1P24867 279 aa3.89□□□□□ -1.79
UBC6YER100W OAC1P32332 324 aa3.89□□□□□ -1.79
UBC6YER100W YPT52P36018 234 aaKnown RBP3.89□□□□□ -1.79
UBC6YER100W COG3P40094 801 aa3.89□□□□□ -1.79
UBC6YER100W YJL016WP47072 561 aa3.89□□□□□ -1.79
UBC6YER100W PRM8P53174 237 aa3.89□□□□□ -1.79
UBC6YER100W ABF2Q02486 183 aa3.89□□□□□ -1.79
UBC6YER100W FLO11P08640 1367 aa3.89□□□□□ -1.79
UBC6YER100W DRS2P39524 1355 aa3.89□□□□□ -1.79
UBC6YER100W ZWF1P11412 505 aaKnown RBP3.88□□□□□ -1.79
UBC6YER100W YAK1P14680 807 aa3.88□□□□□ -1.79
UBC6YER100W CPT1P17898 393 aa3.88□□□□□ -1.79
UBC6YER100W ECM33P38248 429 aaKnown RBP3.88□□□□□ -1.79
UBC6YER100W FES1P38260 290 aa3.88□□□□□ -1.79
UBC6YER100W CAT5P41735 233 aa3.88□□□□□ -1.79
UBC6YER100W YGL159WP53110 370 aa3.88□□□□□ -1.79
UBC6YER100W ERV29P53337 310 aa3.88□□□□□ -1.79
UBC6YER100W YIP3P53633 176 aa3.88□□□□□ -1.79
UBC6YER100W PRR2Q12310 699 aa3.88□□□□□ -1.79
UBC6YER100W AGC1Q12482 902 aa3.88□□□□□ -1.79
UBC6YER100W YHR139C-AO13536 103 aa3.87□□□□□ -1.79
UBC6YER100W IPP1P00817 287 aaKnown RBP3.87□□□□□ -1.79
UBC6YER100W TCA17P32613 152 aa3.87□□□□□ -1.79
UBC6YER100W MRPS9P38120 278 aa3.87□□□□□ -1.79
UBC6YER100W SEO1P39709 593 aa3.87□□□□□ -1.79
UBC6YER100W YFL012WP43580 148 aa3.87□□□□□ -1.79
UBC6YER100W RTC4P53850 401 aa3.87□□□□□ -1.79
UBC6YER100W MRX8Q05473 314 aa3.87□□□□□ -1.79
UBC6YER100W INM2Q05533 292 aa3.87□□□□□ -1.79
UBC6YER100W SLD7Q08457 257 aa3.87□□□□□ -1.79
UBC6YER100W GRE1Q08969 168 aa3.87□□□□□ -1.79
UBC6YER100W USB1Q12208 290 aaKnown RBP3.87□□□□□ -1.79
UBC6YER100W PST1Q12355 444 aa3.87□□□□□ -1.79
UBC6YER100W HTL1Q9URQ5 78 aa3.87□□□□□ -1.79
UBC6YER100W SWI1P09547 1314 aa3.87□□□□□ -1.79
UBC6YER100W SEC22P22214 214 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms