RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C RML2P32611 393 aa2.59□□□□□ -2
RIF1YBR275C UGP1P32861 499 aaKnown RBP2.59□□□□□ -2
RIF1YBR275C ECM33P38248 429 aaKnown RBP2.59□□□□□ -2
RIF1YBR275C YGR201CP42936 225 aa2.59□□□□□ -2
RIF1YBR275C PRM10P42946 383 aa2.59□□□□□ -2
RIF1YBR275C SIP18P50263 79 aa2.59□□□□□ -2
RIF1YBR275C MMS2P53152 137 aa2.59□□□□□ -2
RIF1YBR275C REC102Q02721 264 aa2.59□□□□□ -2
RIF1YBR275C THI7Q05998 598 aa2.59□□□□□ -2
RIF1YBR275C CTR3Q06686 241 aa2.59□□□□□ -2
RIF1YBR275C YOR105WQ08504 108 aa2.59□□□□□ -2
RIF1YBR275C YRA1Q12159 226 aaKnown RBP2.59□□□□□ -2
RIF1YBR275C PUT4P15380 627 aa2.59□□□□□ -2
RIF1YBR275C PPH21P23594 369 aa2.59□□□□□ -2
RIF1YBR275C CSG2P35206 410 aa2.59□□□□□ -2
RIF1YBR275C HEM14P40012 539 aa2.59□□□□□ -2
RIF1YBR275C YFL067WP43537 175 aa2.59□□□□□ -2
RIF1YBR275C SML1Q04964 104 aa2.59□□□□□ -2
RIF1YBR275C YPL257WQ08974 193 aa2.59□□□□□ -2
RIF1YBR275C ERV2Q12284 196 aa2.59□□□□□ -2
RIF1YBR275C MDY2Q12285 212 aa2.59□□□□□ -2
RIF1YBR275C RPS22AP0C0W1 130 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C RPS16AP0CX51 143 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C RPS16BP0CX52 143 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C FAA1P30624 700 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C SUA5P32579 426 aa2.58□□□□□ -2
RIF1YBR275C SOR1P35497 357 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C PHD1P36093 366 aa2.58□□□□□ -2
RIF1YBR275C SOP4P39543 234 aaPredicted RBP2.58□□□□□ -2
RIF1YBR275C YPT11P48559 417 aa2.58□□□□□ -2
RIF1YBR275C BUD9P53226 547 aa2.58□□□□□ -2
RIF1YBR275C RIM9Q04734 239 aa2.58□□□□□ -2
RIF1YBR275C SOR2Q07786 357 aa2.58□□□□□ -2
RIF1YBR275C HSP26P15992 214 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
RIF1YBR275C ATP10P18496 279 aa2.58□□□□□ -2
RIF1YBR275C MAK32P23060 363 aa2.58□□□□□ -2
RIF1YBR275C MTC6P38849 526 aa2.58□□□□□ -2
RIF1YBR275C GTT1P40582 234 aa2.58□□□□□ -2
RIF1YBR275C YJR011CP47086 261 aaPredicted RBP2.58□□□□□ -2
RIF1YBR275C TEX1P53851 422 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C HAL1Q01766 294 aa2.58□□□□□ -2
RIF1YBR275C YLR281CQ05863 155 aa2.58□□□□□ -2
RIF1YBR275C YPR196WQ06595 470 aa2.58□□□□□ -2
RIF1YBR275C HUT1Q12520 339 aa2.58□□□□□ -2
RIF1YBR275C YJR112W-AQ3E743 109 aa2.58□□□□□ -2
RIF1YBR275C HHF1P02309 103 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C ARG1P22768 420 aa2.58□□□□□ -2
RIF1YBR275C CDC10P25342 322 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C YCL049CP25577 312 aa2.58□□□□□ -2
RIF1YBR275C RFA2P26754 273 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C NTG1P31378 399 aa2.58□□□□□ -2
RIF1YBR275C MET22P32179 357 aa2.58□□□□□ -2
RIF1YBR275C MPM1P40364 252 aa2.58□□□□□ -2
RIF1YBR275C MOG1P47123 218 aa2.58□□□□□ -2
RIF1YBR275C COG5P53951 403 aa2.58□□□□□ -2
RIF1YBR275C ECM9Q02202 377 aa2.58□□□□□ -2
RIF1YBR275C ISU1Q03020 165 aa2.58□□□□□ -2
RIF1YBR275C ALG6Q12001 544 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C ERG27Q12452 347 aaKnown RBP2.58□□□□□ -2
RIF1YBR275C YOR093CQ12275 1648 aa2.58□□□□□ -2
RIF1YBR275C SNO3P43544 222 aa2.58□□□□□ -2
RIF1YBR275C YJL163CP46996 555 aa2.58□□□□□ -2
RIF1YBR275C NIF3P53081 288 aa2.58□□□□□ -2
RIF1YBR275C YMR209CQ03648 457 aa2.58□□□□□ -2
RIF1YBR275C PFA4Q12006 378 aa2.58□□□□□ -2
RIF1YBR275C YLR462WO13556 202 aa2.57□□□□□ -2
RIF1YBR275C SNF3P10870 884 aa2.57□□□□□ -2
RIF1YBR275C STP2P38704 541 aa2.57□□□□□ -2
RIF1YBR275C YFL064CP43540 174 aa2.57□□□□□ -2
RIF1YBR275C YNR066CP53752 436 aa2.57□□□□□ -2
RIF1YBR275C HXT11P54862 567 aa2.57□□□□□ -2
RIF1YBR275C YDR042CQ03205 200 aa2.57□□□□□ -2
RIF1YBR275C PPM1Q04081 328 aa2.57□□□□□ -2
RIF1YBR275C ATG39Q06159 398 aa2.57□□□□□ -2
RIF1YBR275C YMR105W-AQ8TGS8 64 aa2.57□□□□□ -2
RIF1YBR275C ADH1P00330 348 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C YLR156WP0CE96 114 aa2.57□□□□□ -2
RIF1YBR275C YLR159WP0CE97 114 aa2.57□□□□□ -2
RIF1YBR275C YLR161WP0CE98 114 aa2.57□□□□□ -2
RIF1YBR275C YLR157W-DP0CE99 70 aa2.57□□□□□ -2
RIF1YBR275C DPM1P14020 267 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C RHB1P25378 209 aa2.57□□□□□ -2
RIF1YBR275C YCR090CP25654 182 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C OCH1P31755 480 aa2.57□□□□□ -2
RIF1YBR275C DER1P38307 211 aa2.57□□□□□ -2
RIF1YBR275C SNG1P46950 547 aa2.57□□□□□ -2
RIF1YBR275C ILM1P47155 203 aa2.57□□□□□ -2
RIF1YBR275C ATP23P53722 227 aa2.57□□□□□ -2
RIF1YBR275C REX2P54964 269 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C HRI1Q05905 244 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C EMC6Q12431 108 aa2.57□□□□□ -2
RIF1YBR275C PAR32Q12515 295 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C CSM1P25651 190 aa2.57□□□□□ -2
RIF1YBR275C PDX3P38075 228 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C SSH1P38353 490 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C COX15P40086 486 aa2.57□□□□□ -2
RIF1YBR275C SLX9P53251 210 aaPredicted RBP2.57□□□□□ -2
RIF1YBR275C SCW4P53334 386 aaKnown RBP2.57□□□□□ -2
RIF1YBR275C ATG41Q12048 136 aa2.57□□□□□ -2
RIF1YBR275C CRC1Q12289 327 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms