RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W VPS60Q03390 229 aa3.6□□□□□ -1.83
CKS1YBR135W ARC18Q05933 178 aaKnown RBP3.6□□□□□ -1.83
CKS1YBR135W ATG31Q12421 196 aa3.6□□□□□ -1.83
CKS1YBR135W FAB1P34756 2278 aa3.59□□□□□ -1.83
CKS1YBR135W TDH2P00358 332 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W NHP6BP11633 99 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W YAK1P14680 807 aa3.59□□□□□ -1.83
CKS1YBR135W PEX34P25584 144 aa3.59□□□□□ -1.83
CKS1YBR135W IMP1P28627 190 aa3.59□□□□□ -1.83
CKS1YBR135W EGD2P38879 174 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W DDI1P40087 428 aa3.59□□□□□ -1.83
CKS1YBR135W RFC4P40339 323 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W AVT7P40501 490 aa3.59□□□□□ -1.83
CKS1YBR135W YRB1P41920 201 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W TAD2P47058 250 aa3.59□□□□□ -1.83
CKS1YBR135W PRP24P49960 444 aaKnown RBP3.59□□□□□ -1.83
CKS1YBR135W YLR283WQ05867 314 aa3.59□□□□□ -1.83
CKS1YBR135W LOA1Q06508 300 aa3.59□□□□□ -1.83
CKS1YBR135W TOR1P35169 2470 aa3.59□□□□□ -1.84
CKS1YBR135W RAD3P06839 778 aa3.58□□□□□ -1.84
CKS1YBR135W DAL82P21705 255 aa3.58□□□□□ -1.84
CKS1YBR135W RRT12P25381 491 aa3.58□□□□□ -1.84
CKS1YBR135W PBN1P25580 416 aa3.58□□□□□ -1.84
CKS1YBR135W PPA2P28239 310 aa3.58□□□□□ -1.84
CKS1YBR135W SEN34P39707 275 aa3.58□□□□□ -1.84
CKS1YBR135W HYR1P40581 163 aaKnown RBP3.58□□□□□ -1.84
CKS1YBR135W GLG2P47011 380 aa3.58□□□□□ -1.84
CKS1YBR135W COG7P53195 279 aa3.58□□□□□ -1.84
CKS1YBR135W HST4P53688 370 aa3.58□□□□□ -1.84
CKS1YBR135W CUS2P53830 285 aaPredicted RBP3.58□□□□□ -1.84
CKS1YBR135W OST6Q03723 332 aa3.58□□□□□ -1.84
CKS1YBR135W SEC10Q06245 871 aa3.58□□□□□ -1.84
CKS1YBR135W CDD1Q06549 142 aa3.58□□□□□ -1.84
CKS1YBR135W ABP140Q08641 628 aaKnown RBP3.58□□□□□ -1.84
CKS1YBR135W YDL012CQ12489 107 aa3.58□□□□□ -1.84
CKS1YBR135W DDP1Q99321 188 aaKnown RBP3.58□□□□□ -1.84
CKS1YBR135W LAA1P39526 2014 aa3.58□□□□□ -1.84
CKS1YBR135W YAL064W-BO13512 126 aa3.57□□□□□ -1.84
CKS1YBR135W HIS1P00498 297 aaKnown RBP3.57□□□□□ -1.84
CKS1YBR135W MATALPHA1P0CY06 175 aa3.57□□□□□ -1.84
CKS1YBR135W HMLALPHA1P0CY07 175 aa3.57□□□□□ -1.84
CKS1YBR135W CUP2P15315 225 aa3.57□□□□□ -1.84
CKS1YBR135W CPT1P17898 393 aa3.57□□□□□ -1.84
CKS1YBR135W PEX3P28795 441 aa3.57□□□□□ -1.84
CKS1YBR135W TKL2P33315 681 aa3.57□□□□□ -1.84
CKS1YBR135W RSM25P40496 264 aa3.57□□□□□ -1.84
CKS1YBR135W UFD1P53044 361 aa3.57□□□□□ -1.84
CKS1YBR135W MRPL50P53724 139 aa3.57□□□□□ -1.84
CKS1YBR135W ADH6Q04894 360 aaKnown RBP3.57□□□□□ -1.84
CKS1YBR135W YMR226CQ05016 267 aaKnown RBP3.57□□□□□ -1.84
CKS1YBR135W NNT1Q05874 261 aa3.57□□□□□ -1.84
CKS1YBR135W GPM2Q12008 311 aa3.57□□□□□ -1.84
CKS1YBR135W PER33Q12144 273 aa3.57□□□□□ -1.84
CKS1YBR135W YOR029WQ12243 111 aa3.57□□□□□ -1.84
CKS1YBR135W ATP7P30902 174 aa3.56□□□□□ -1.84
CKS1YBR135W VPS51P36116 164 aa3.56□□□□□ -1.84
CKS1YBR135W YHL044WP38727 235 aa3.56□□□□□ -1.84
CKS1YBR135W SUR2P38992 349 aa3.56□□□□□ -1.84
CKS1YBR135W SER33P40510 469 aa3.56□□□□□ -1.84
CKS1YBR135W CPR7P47103 393 aa3.56□□□□□ -1.84
CKS1YBR135W MIG2P53035 382 aa3.56□□□□□ -1.84
CKS1YBR135W DIA1P54005 336 aa3.56□□□□□ -1.84
CKS1YBR135W MRS2Q01926 470 aa3.56□□□□□ -1.84
CKS1YBR135W SDC1Q03323 175 aa3.56□□□□□ -1.84
CKS1YBR135W MZM1Q03429 123 aaPredicted RBP3.56□□□□□ -1.84
CKS1YBR135W CTR3Q06686 241 aa3.56□□□□□ -1.84
CKS1YBR135W PAM18Q07914 168 aa3.56□□□□□ -1.84
CKS1YBR135W SME1Q12330 94 aaPredicted RBP3.56□□□□□ -1.84
CKS1YBR135W RPL27AP0C2H6 136 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W RPL27BP0C2H7 136 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W NOP1P15646 327 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W PHO80P20052 293 aa3.55□□□□□ -1.84
CKS1YBR135W RPL24BP24000 155 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W MED6P38782 295 aa3.55□□□□□ -1.84
CKS1YBR135W SEC72P39742 193 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W AVT6P40074 448 aa3.55□□□□□ -1.84
CKS1YBR135W SWS2P53937 143 aa3.55□□□□□ -1.84
CKS1YBR135W YPL264CQ08980 353 aa3.55□□□□□ -1.84
CKS1YBR135W YRA1Q12159 226 aaKnown RBP3.55□□□□□ -1.84
CKS1YBR135W FMP27Q06179 2628 aa3.55□□□□□ -1.84
CKS1YBR135W CDC33P07260 213 aaKnown RBP3.54□□□□□ -1.84
CKS1YBR135W DPB2P24482 689 aaPredicted RBP3.54□□□□□ -1.84
CKS1YBR135W RPS5P26783 225 aaKnown RBP3.54□□□□□ -1.84
CKS1YBR135W TPS2P31688 896 aaKnown RBP3.54□□□□□ -1.84
CKS1YBR135W ALK2P32789 676 aaPredicted RBP3.54□□□□□ -1.84
CKS1YBR135W YPT52P36018 234 aaKnown RBP3.54□□□□□ -1.84
CKS1YBR135W POP8P38208 133 aa3.54□□□□□ -1.84
CKS1YBR135W LDB7P38210 180 aa3.54□□□□□ -1.84
CKS1YBR135W AVT2P39981 480 aa3.54□□□□□ -1.84
CKS1YBR135W DSN1P40568 576 aa3.54□□□□□ -1.84
CKS1YBR135W SYS1P41544 203 aa3.54□□□□□ -1.84
CKS1YBR135W ASG7P46993 209 aa3.54□□□□□ -1.84
CKS1YBR135W EBS1Q03466 884 aaKnown RBP3.54□□□□□ -1.84
CKS1YBR135W BEM2P39960 2167 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W YMR316C-AI2HB70 103 aa3.53□□□□□ -1.84
CKS1YBR135W RHO1P06780 209 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W CBF1P17106 351 aa3.53□□□□□ -1.84
CKS1YBR135W PRE7P23724 241 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W CAT2P32796 670 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W UBC6P33296 250 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms