RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 INO80B-WBP1J3KQ70 363 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 K7ERI5 159 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 EDN1P05305 212 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 PRKCBP05771 671 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 RFX1P22670 979 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 CCNE1P24864 410 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 PMS1P54277 932 aaKnown RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 CDC42EP1Q00587 391 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 MYL5Q02045 173 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 LRRC63Q05C16 580 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 ITIH3Q06033 890 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 POU5F1BQ06416 359 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 MGAT3Q09327 533 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 LPIN1Q14693 890 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 MAPK6Q16659 721 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 CENPPQ6IPU0 288 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 FAM43BQ6ZT52 329 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 DHX40Q8IX18 779 aaKnown RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 THNSL1Q8IYQ7 743 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 SYCP3Q8IZU3 236 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 CASP10Q92851 521 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 BICD1Q96G01 975 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 MED15Q96RN5 788 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 APOL5Q9BWW9 433 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 GCOM2Q9BZD3 368 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 OSBPL7Q9BZF2 842 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 S1PR5Q9H228 398 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 IKZF4Q9H2S9 585 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 KCTD10Q9H3F6 313 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 TYW1Q9NV66 732 aaKnown RBP10.26□□□□□ -0.77
PHGDH-228ENST00000641847 CDY2AQ9Y6F7 541 aa10.26□□□□□ -0.77
PHGDH-228ENST00000641847 BECN2A8MW95 431 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 STK25O00506 426 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 HNRNPDLO14979 420 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CALUO43852 315 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 DARSP14868 501 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 AOC1P19801 751 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 MTHFRP42898 656 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CRYBB1P53674 252 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 BMS1Q14692 1282 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 IQCB1Q15051 598 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 TPD52L1Q16890 204 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 ZCWPW2Q504Y3 356 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 ANKRD40Q6AI12 368 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 TTI2Q6NXR4 508 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 LLGL2Q6P1M3 1020 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 HS2ST1Q7LGA3 356 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 SRGAP1Q7Z6B7 1085 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CCDC105Q8IYK2 499 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 TDRD5Q8NAT2 981 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 GOLGA5Q8TBA6 731 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 ENOX1Q8TC92 643 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM40Q8WWA1 233 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 RUBCNQ92622 972 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CELF4Q9BZC1 486 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 GBP3Q9H0R5 595 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 FZD8Q9H461 694 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CDHR5Q9HBB8 845 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 NGRNQ9NPE2 291 aaKnown RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 ENTPD7Q9NQZ7 604 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 AGPAT3Q9NRZ7 376 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 PRMT7Q9NVM4 692 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-228ENST00000641847 FBXL21Q9UKT6 434 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 PCDHB7Q9Y5E2 793 aa10.25□□□□□ -0.77
PHGDH-228ENST00000641847 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TISP43B9A030 160 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ACKR2O00590 384 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 PDXKO00764 312 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 IKBKBO14920 756 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 B4GALT5O43286 388 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TGFB1I1O43294 461 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TSPAN1O60635 241 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 CSDE1O75534 798 aaKnown RBP10.24□□□□□ -0.77
PHGDH-228ENST00000641847 FGF18O76093 207 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 ERLIN2O94905 339 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 PIGRP01833 764 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 NR3C1P04150 777 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 FGFR4P22455 802 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 SFPQP23246 707 aaKnown RBP eCLIP10.24□□□□□ -0.77
PHGDH-228ENST00000641847 LIG4P49917 911 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 RBM10P98175 930 aaKnown RBP10.24□□□□□ -0.77
PHGDH-228ENST00000641847 PAK2Q13177 524 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
PHGDH-228ENST00000641847 NCAPHQ15003 741 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 FAM187BQ17R55 369 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 FBXO47Q5MNV8 452 aa10.24□□□□□ -0.77
PHGDH-228ENST00000641847 SPATA1Q5VX52 437 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms