RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 AGBL3Q8NEM8 1001 aa17.98■□□□□ 0.47
PHGDH-223ENST00000641597 TMEM174Q8WUU8 243 aa17.98■□□□□ 0.47
PHGDH-223ENST00000641597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHGDH-223ENST00000641597 USTQ9Y2C2 406 aa17.98■□□□□ 0.47
PHGDH-223ENST00000641597 COL11A1P12107 1806 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 PODXLO00592 558 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MAPK13O15264 365 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ECEL1O95672 775 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 PAEPP09466 180 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 EIF3BP55884 814 aaKnown RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 TAS2R40P59535 323 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 GHRHRQ02643 423 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 AUHQ13825 339 aaKnown RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ATP13A4Q4VNC1 1196 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 HOOK3Q86VS8 718 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MCOLN2Q8IZK6 566 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 FAM129AQ9BZQ8 928 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 APOBEC3GQ9HC16 384 aaKnown RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MTUS1Q9ULD2 1270 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ZBED4O75132 1171 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 FSBPO95073 299 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MMP13P45452 471 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ADCY2Q08462 1091 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 PPP2R5EQ16537 467 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 LRRC34Q8IZ02 419 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MTMR14Q8NCE2 650 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ZNF317Q96PQ6 595 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 IWS1Q96ST2 819 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
PHGDH-223ENST00000641597 MTRF1LQ9UGC7 380 aaKnown RBP17.97■□□□□ 0.47
PHGDH-223ENST00000641597 RALAP11233 206 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CD58P19256 250 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 SFNP31947 248 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 ACTR2P61160 394 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 ACTN3Q08043 901 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-223ENST00000641597 KYNUQ16719 465 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 MMS22LQ6ZRQ5 1243 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 MICALCLQ6ZW33 695 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 ACSF2Q96CM8 615 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CHMP6Q96FZ7 201 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 PGM2Q96G03 612 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CCDC114Q96M63 670 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CYP26B1Q9NR63 512 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 UVRAGQ9P2Y5 699 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 PASKQ96RG2 1323 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 RASGRF2O14827 1237 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 VNN1O95497 513 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 HLA-DRAP01903 254 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 ATP4AP20648 1035 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 SSR1P43307 286 aaKnown RBP17.96■□□□□ 0.47
PHGDH-223ENST00000641597 FAM182AQ5T1J6 154 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 ICE2Q659A1 982 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CIAPIN1Q6FI81 312 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 DLK2Q6UY11 383 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CCDC121Q6ZUS5 278 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 CNPY4Q8N129 248 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 NTPCRQ9BSD7 190 aaKnown RBP17.96■□□□□ 0.47
PHGDH-223ENST00000641597 C1orf112Q9NSG2 853 aa17.96■□□□□ 0.47
PHGDH-223ENST00000641597 GOLGA6L7A0A1B0GV03 622 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 PMM2O15305 246 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 HSPA6P17066 643 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 IVDP26440 423 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 PSMC4P43686 418 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 PRKG1Q13976 671 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 TMEM132BQ14DG7 1078 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 HP1BP3Q5SSJ5 553 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 TMEM270Q6UE05 265 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 EXOC3L1Q86VI1 746 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 TMEM130Q8N3G9 435 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 TMC2Q8TDI7 906 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 JPH1Q9HDC5 661 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 PDLIM7Q9NR12 457 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 TBK1Q9UHD2 729 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 PI4K2BG5E9Z4 385 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 FSCN2O14926 492 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 RARGP13631 454 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 LIG4P49917 911 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 ITGA8P53708 1063 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 CRELD2Q6UXH1 353 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 GLIS1Q8NBF1 620 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 OR5B17Q8NGF7 314 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 KIFAP3Q92845 792 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
PHGDH-223ENST00000641597 LRRC19Q9H756 370 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 HAUS2Q9NVX0 235 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 HACL1Q9UJ83 578 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
PHGDH-223ENST00000641597 C5orf60A6NFR6 353 aa17.94■□□□□ 0.46
PHGDH-223ENST00000641597 GH1P01241 217 aa17.94■□□□□ 0.46
PHGDH-223ENST00000641597 CETPP11597 493 aa17.94■□□□□ 0.46
PHGDH-223ENST00000641597 CCND2P30279 289 aa17.94■□□□□ 0.46
PHGDH-223ENST00000641597 CALCOCO2Q13137 446 aa17.94■□□□□ 0.46
PHGDH-223ENST00000641597 DRP2Q13474 957 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms