RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 UBE2Q1Q7Z7E8 422 aa21.43■■□□□ 1.02
PHGDH-210ENST00000641115 CCDC150Q8NCX0 1101 aa21.43■■□□□ 1.02
PHGDH-210ENST00000641115 OR5B17Q8NGF7 314 aa21.43■■□□□ 1.02
PHGDH-210ENST00000641115 DERAQ9Y315 318 aa21.43■■□□□ 1.02
PHGDH-210ENST00000641115 A0A0U1RQF3 1178 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 AKR1B15C9JRZ8 316 aaPredicted RBP21.42■■□□□ 1.02
PHGDH-210ENST00000641115 PIK3CAP42336 1068 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 CNGA4Q8IV77 575 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 EHBP1Q8NDI1 1231 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 TAS1R2Q8TE23 839 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 KIF12Q96FN5 646 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 TTYH3Q9C0H2 523 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 PRDM5Q9NQX1 630 aaPredicted RBP21.42■■□□□ 1.02
PHGDH-210ENST00000641115 RGS18Q9NS28 235 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 RAB20Q9NX57 234 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 CNTN3Q9P232 1028 aa21.42■■□□□ 1.02
PHGDH-210ENST00000641115 A0A1W2PQJ5 194 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 ZNF623O75123 536 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 ACTN1P12814 892 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 GPNMBQ14956 572 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 CACNA2D4Q7Z3S7 1137 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 DBF4BQ8NFT6 615 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 PGBD4Q96DM1 585 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 TRIM44Q96DX7 344 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-210ENST00000641115 FAM84AQ96KN4 292 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 TSPAN18Q96SJ8 248 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 RNF39Q9H2S5 420 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 C1orf112Q9NSG2 853 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 CEP72Q9P209 647 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 CAPN11Q9UMQ6 739 aa21.41■■□□□ 1.02
PHGDH-210ENST00000641115 LUC7L2Q9Y383 392 aaKnown RBP21.41■■□□□ 1.02
PHGDH-210ENST00000641115 EPHB6O15197 1021 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 MFAP3LO75121 409 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 FXR1P51114 621 aaKnown RBP eCLIP21.4■■□□□ 1.026e-7■■■■□ 19.4
PHGDH-210ENST00000641115 KLHDC7AQ5VTJ3 777 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 TRAPPC11Q7Z392 1133 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 MRPL10Q7Z7H8 261 aaKnown RBP21.4■■□□□ 1.02
PHGDH-210ENST00000641115 ZNF397Q8NF99 534 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-210ENST00000641115 LMO3Q8TAP4 145 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 EDEM3Q9BZQ6 932 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 GANQ9H2C0 597 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 KLK14Q9P0G3 267 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 APEX2Q9UBZ4 518 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 DAAM1Q9Y4D1 1078 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 NOL4O94818 638 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 HLA-DRAP01903 254 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 CXCL10P02778 98 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 UCHL3P15374 230 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 RFX1P22670 979 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 RFC2P35250 354 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 ADKP55263 362 aaKnown RBP21.4■■□□□ 1.02
PHGDH-210ENST00000641115 POLR2FP61218 127 aaKnown RBP21.4■■□□□ 1.02
PHGDH-210ENST00000641115 ALKAL1Q6UXT8 129 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 SLC24A5Q71RS6 500 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 RNF169Q8NCN4 708 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 SEMA4DQ92854 862 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 IMPG2Q9BZV3 1241 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 TSPYL2Q9H2G4 693 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-210ENST00000641115 SIX2Q9NPC8 291 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 FBXL5Q9UKA1 691 aa21.4■■□□□ 1.02
PHGDH-210ENST00000641115 ALPK3Q96L96 1907 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 KIAA0355O15063 1070 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 XPOTO43592 962 aaKnown RBP21.39■■□□□ 1.01
PHGDH-210ENST00000641115 ZC3H11AO75152 810 aaKnown RBP eCLIP21.39■■□□□ 1.01
PHGDH-210ENST00000641115 CLSTN1O94985 981 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 TIMP1P01033 207 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 IBSPP21815 317 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-210ENST00000641115 APBA1Q02410 837 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 TRPC3Q13507 836 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 NCOA4Q13772 614 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 XKR4Q5GH76 650 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 WDR44Q5JSH3 913 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 ECHDC2Q86YB7 292 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 NT5C1BQ96P26 610 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 RPS6KC1Q96S38 1066 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 GIT1Q9Y2X7 761 aa21.39■■□□□ 1.01
PHGDH-210ENST00000641115 R3HCC1Q9Y3T6 440 aaKnown RBP21.39■■□□□ 1.01
PHGDH-210ENST00000641115 C9IYK1 514 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 VNN1O95497 513 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 KCNE1P15382 129 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 RAG1P15918 1043 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 KRT9P35527 623 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 ZBED6P86452 979 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 GLRA4Q5JXX5 417 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 DPY19L2P1Q6NXN4 242 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 DEFB128Q7Z7B8 93 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 TC2NQ8N9U0 490 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 BEST2Q8NFU1 509 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 LINC01599Q8WXQ3 324 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 LPPQ93052 612 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 UBN1Q9NPG3 1134 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 NLRC4Q9NPP4 1024 aa21.38■■□□□ 1.01
PHGDH-210ENST00000641115 SMIM28A0A1B0GU29 152 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 EOMESO95936 686 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 KRT19P08727 400 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 MLH1P40692 756 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 GOLGA8FQ08AF8 430 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 GOLGA8DPQ0D2H9 430 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 LRMPQ12912 555 aa21.37■■□□□ 1.01
PHGDH-210ENST00000641115 AGMOQ6ZNB7 445 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms