RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 MED30Q96HR3 178 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 ATP6V1G3Q96LB4 118 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 PSKH2Q96QS6 385 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 SEMA4AQ9H3S1 761 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
RTTN-223ENST00000640931 PPANQ9NQ55 473 aaKnown RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 NFE2L3Q9Y4A8 694 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 MYH8P13535 1937 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 PNMA6FA0A0J9YX94 578 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 GOLGA8CPA6NN73 597 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 FAM47E-STBD1D6RA91 191 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 SERPINC1P01008 464 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 PLCG1P19174 1290 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 TNFRSF8P28908 595 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 HOXA13P31271 388 aaPredicted RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 CCNFP41002 786 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 CETN2P41208 172 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 MSH2P43246 934 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 TRAPPC10P48553 1259 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 UBASH3AP57075 661 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 HSPA14Q0VDF9 509 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 DCTN2Q13561 401 aaKnown RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 DPYSQ14117 519 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 COG2Q14746 738 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 DLGAP5Q15398 846 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 QPCTQ16769 361 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 SIGIRRQ6IA17 410 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 TAOK1Q7L7X3 1001 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 KCNK18Q7Z418 384 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 NEK8Q86SG6 692 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 NDUFAF2Q8N183 169 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 SIX5Q8N196 739 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 RBBP8NLQ8NC74 664 aaPredicted RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 KLHL4Q9C0H6 718 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 MUC3BQ9H195 1237 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 RNPEPL1Q9HAU8 725 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 CRNNQ9UBG3 495 aaPredicted RBP8.47□□□□□ -1.05
RTTN-223ENST00000640931 ACAD8Q9UKU7 415 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 MROH7Q68CQ1 1323 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 MYH4Q9Y623 1939 aa8.47□□□□□ -1.05
RTTN-223ENST00000640931 SMCHD1A6NHR9 2005 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 NFKBIEO00221 500 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 ZBTB5O15062 677 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 IDH3BO43837 385 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 B4GALT4O60513 344 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 KCNJ13O60928 360 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 TJP3O95049 919 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 LMNAP02545 664 aaKnown RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 GLI1P08151 1106 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 OR52Z1P0C646 297 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 SERPINB6P35237 376 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 STAT3P40763 770 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 RELAQ04206 551 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 IKQ13123 557 aaPredicted RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 ITGA9Q13797 1035 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 NR1D2Q14995 579 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 LIN52Q52LA3 116 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 RRAGBQ5VZM2 374 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 PPP2R2DQ66LE6 453 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 Q6ZNX1 250 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 ARHGEF18Q6ZSZ5 1173 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 KRT25Q7Z3Z0 450 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 CROCCP3Q8IVE0 287 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 RHOT2Q8IXI1 618 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 ALDH16A1Q8IZ83 802 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 SPARTQ8N0X7 666 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 SLC35F6Q8N357 371 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 SH2D3CQ8N5H7 860 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 ENDOVQ8N8Q3 282 aaKnown RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 NLGN2Q8NFZ4 835 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 GATA6Q92908 595 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 VPS50Q96JG6 964 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 CEP63Q96MT8 703 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 GREB1LQ9C091 1923 aaPredicted RBP8.46□□□□□ -1.05
RTTN-223ENST00000640931 POLD4Q9HCU8 107 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 STIM2Q9P246 746 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 BCS1LQ9Y276 419 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 USH1CQ9Y6N9 552 aa8.46□□□□□ -1.05
RTTN-223ENST00000640931 RGPD3A6NKT7 1758 aaPredicted RBP8.46□□□□□ -1.06
RTTN-223ENST00000640931 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.06
RTTN-223ENST00000640931 ZNF536O15090 1300 aa8.46□□□□□ -1.06
RTTN-223ENST00000640931 CASP14P31944 242 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 LONP1P36776 959 aaKnown RBP8.45□□□□□ -1.06
RTTN-223ENST00000640931 RAD23BP54727 409 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 UBXN2AP68543 259 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 FAM83BQ5T0W9 1011 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 C6orf183Q5T699 404 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 ZNF662Q6ZS27 426 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 TRAPPC11Q7Z392 1133 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 CPLX4Q7Z7G2 160 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 PPFIBP2Q8ND30 876 aa8.45□□□□□ -1.06
RTTN-223ENST00000640931 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms