RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 C18orf8Q96DM3 657 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CLMNQ96JQ2 1002 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF317Q96PQ6 595 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 UPF3AQ9H1J1 476 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 VPS11Q9H270 941 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 TIMMDC1Q9NPL8 285 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 BTBD7Q9P203 1132 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF711Q9Y462 761 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PALM3A6NDB9 673 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KPNA7A9QM74 516 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 TRPA1O75762 1119 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT7P08729 469 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CCNB1P14635 433 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ATP2B4P23634 1241 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KPNA2P52292 529 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 NLRP11P59045 1033 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PDE1BQ01064 536 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PDK4Q16654 411 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ASTE1Q2TB18 679 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KAZNQ674X7 775 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DNAJC24Q6P3W2 148 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 USP17L2Q6R6M4 530 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 IZUMO2Q6UXV1 221 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 LRRC55Q6ZSA7 311 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CAPN12Q6ZSI9 719 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 EXOC3L1Q86VI1 746 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ZBED8Q8IZ13 594 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PIK3R5Q8WYR1 880 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 COA7Q96BR5 231 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DGCR14Q96DF8 476 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 NDNQ99608 321 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 THTPAQ9BU02 230 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 GANQ9H2C0 597 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 LRRC19Q9H756 370 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ARHGEF10LQ9HCE6 1279 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 GINM1Q9NU53 330 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 STX18Q9P2W9 335 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DTNAQ9Y4J8 743 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PCDHA3Q9Y5H8 950 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ARHGAP23Q9P227 1491 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF804BA4D1E1 1349 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 FRMPD2Q68DX3 1309 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 EIF4E1BA6NMX2 242 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CHMP2AO43633 222 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 TOM1L1O75674 476 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CLPTM1O96005 669 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ECE1P42892 770 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 SLC18A1P54219 525 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CACNB1Q02641 598 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 PICALMQ13492 652 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 RASA3Q14644 834 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT72Q14CN4 511 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 MAPRE2Q15555 327 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 Q4G0T1 1027 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 HGSNATQ68CP4 663 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 SLFN11Q7Z7L1 901 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 MTDHQ86UE4 582 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CHURC1Q8WUH1 139 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 WDR60Q8WVS4 1066 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ASCC2Q9H1I8 757 aaPredicted RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 SSU72Q9NP77 194 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DNAJC17Q9NVM6 304 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 LGALS13Q9UHV8 139 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 AP4S1Q9Y587 144 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 ZC3H4Q9UPT8 1303 aaKnown RBP5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 MYO5BQ9ULV0 1848 aa5.3□□□□□ -1.56
HNRNPU-230ENST00000640657 CCDC189A1A4V9 331 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 USP17L3A6NCW0 530 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 USP17L4A6NCW7 530 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 H0YGN5 161 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 PDLIM1O00151 329 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 CLDN3O15551 220 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 TNFAIP8O95379 198 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 ENO1P06733 434 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 USP17L8P0C7I0 530 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 IMPDH2P12268 514 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 EPHB2P29323 1055 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 BTDP43251 543 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 TMED10P49755 219 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 ARSEP51690 589 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 ADARP55265 1226 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 CDK16Q00536 496 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 STX3Q13277 289 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 PPP2R5CQ13362 524 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 TRIP10Q15642 601 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 P3H1Q32P28 736 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 EARS2Q5JPH6 523 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 EFHC1Q5JVL4 640 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 USP17L1Q7RTZ2 530 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 RFX6Q8HWS3 928 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms